Validation Report - geos@0.2.4
Context
This report is fully automated and builds on rhub/ref-image image. Documents the installation of this package on an open source R environment, focusing on:
- Installation environment description
- Testing coverage
It is limited to assess whether unit tests and documentation are present and can execute without error. An assessment would be required that the tests and documentation are meaningful.
Package geos
Metric based risk assessment
The following metrics are derived from the riskmetric
R package.
has_news | 1 |
news_current | TRUE |
exported_namespace | 200 |
has_vignettes | 0 |
export_help | 200 |
has_website | TRUE |
has_maintainer | Dewey Dunnington dewey@fishandwhistle.net |
bugs_status | 0.8 |
assess_size_codebase | 1937 |
has_source_control | https://github.com/paleolimbot/geos/ |
has_bug_reports_url | 1 |
downloads_1yr | 13545 |
reverse_dependencies | 8 |
has_examples | 1 |
dependencies | 4 |
license | MIT + file LICENSE |
Package general assessment: Coverage, check results, size, download the last year, reverse dependencies and number of dependencies.
Dependencies
Overall the package has these dependencies:
package | type | |
---|---|---|
1 | libgeos (>= 3.8.1-4) | Imports |
2 | wk (>= 0.4.1) | Imports |
3 | libgeos | LinkingTo |
4 | wk | LinkingTo |
Package dependencies
Reverse dependencies
Overall the package has 8 reverse dependencies:
bigDM, centerline, fasterize, geomander, ggredist, hydroloom, osdatahub, redistmetrics
Namespace
Overall the package has 200 exported objects. 200 are documented:
as_geos_geometry as_geos_strtree
TRUE TRUE
as_geos_type_id geos_area
TRUE TRUE
geos_basic_strtree geos_basic_strtree_finalized
TRUE TRUE
geos_basic_strtree_insert geos_basic_strtree_query
TRUE TRUE
geos_basic_strtree_query_filtered geos_basic_strtree_size
TRUE TRUE
geos_boundary geos_buffer
TRUE TRUE
geos_buffer_params geos_build_area
TRUE TRUE
geos_centroid geos_clearance_line_between
TRUE TRUE
geos_clip_by_rect geos_clone
TRUE TRUE
geos_concave_hull geos_concave_hull_of_polygons
TRUE TRUE
geos_constrained_delaunay_triangles geos_contains
TRUE TRUE
geos_contains_any geos_contains_matrix
TRUE TRUE
geos_contains_properly_any geos_contains_properly_matrix
TRUE TRUE
geos_convex_hull geos_coordinate_dimension
TRUE TRUE
geos_coverage_union geos_covered_by
TRUE TRUE
geos_covered_by_any geos_covered_by_matrix
TRUE TRUE
geos_covers geos_covers_any
TRUE TRUE
geos_covers_matrix geos_create_rectangle
TRUE TRUE
geos_crosses geos_crosses_any
TRUE TRUE
geos_crosses_matrix geos_delaunay_edges
TRUE TRUE
geos_delaunay_triangles geos_densify
TRUE TRUE
geos_difference geos_difference_prec
TRUE TRUE
geos_dimension geos_disjoint
TRUE TRUE
geos_disjoint_any geos_disjoint_matrix
TRUE TRUE
geos_distance geos_distance_frechet
TRUE TRUE
geos_distance_hausdorff geos_distance_indexed
TRUE TRUE
geos_empty geos_envelope
TRUE TRUE
geos_envelope_rct geos_equals
TRUE TRUE
geos_equals_any geos_equals_exact
TRUE TRUE
geos_equals_exact_any geos_equals_exact_matrix
TRUE TRUE
geos_equals_matrix geos_extent
TRUE TRUE
geos_geometry geos_geometry_n
TRUE TRUE
geos_geometry_writer geos_has_z
TRUE TRUE
geos_hilbert_code geos_inner_join
TRUE TRUE
geos_inner_join_keys geos_interpolate
TRUE TRUE
geos_interpolate_normalized geos_intersection
TRUE TRUE
geos_intersection_prec geos_intersects
TRUE TRUE
geos_intersects_any geos_intersects_matrix
TRUE TRUE
geos_is_clockwise geos_is_closed
TRUE TRUE
geos_is_empty geos_is_ring
TRUE TRUE
geos_is_simple geos_is_valid
TRUE TRUE
geos_is_valid_detail geos_is_within_distance
TRUE TRUE
geos_largest_empty_circle_spec geos_largest_empty_crc
TRUE TRUE
geos_length geos_line_merge
TRUE TRUE
geos_line_merge_directed geos_make_collection
TRUE TRUE
geos_make_linestring geos_make_point
TRUE TRUE
geos_make_polygon geos_make_valid
TRUE TRUE
geos_make_valid_params geos_maximum_inscribed_circle_spec
TRUE TRUE
geos_maximum_inscribed_crc geos_merge_lines
TRUE TRUE
geos_minimum_bounding_circle geos_minimum_bounding_crc
TRUE TRUE
geos_minimum_clearance geos_minimum_clearance_line
TRUE TRUE
geos_minimum_rotated_rectangle geos_minimum_width
TRUE TRUE
geos_nearest geos_nearest_frechet
TRUE TRUE
geos_nearest_hausdorff geos_nearest_indexed
TRUE TRUE
geos_node geos_normalize
TRUE TRUE
geos_num_coordinates geos_num_geometries
TRUE TRUE
geos_num_interior_rings geos_num_rings
TRUE TRUE
geos_offset_curve geos_orientation_index
TRUE TRUE
geos_overlaps geos_overlaps_any
TRUE TRUE
geos_overlaps_matrix geos_point_end
TRUE TRUE
geos_point_n geos_point_on_surface
TRUE TRUE
geos_point_start geos_polygon_hull_simplify
TRUE TRUE
geos_polygonize geos_polygonize_cut_edges
TRUE TRUE
geos_polygonize_full geos_polygonize_valid
TRUE TRUE
geos_precision geos_prepared_contains
TRUE TRUE
geos_prepared_contains_properly geos_prepared_covered_by
TRUE TRUE
geos_prepared_covers geos_prepared_crosses
TRUE TRUE
geos_prepared_disjoint geos_prepared_distance
TRUE TRUE
geos_prepared_intersects geos_prepared_is_within_distance
TRUE TRUE
geos_prepared_overlaps geos_prepared_touches
TRUE TRUE
geos_prepared_within geos_project
TRUE TRUE
geos_project_normalized geos_read_geojson
TRUE TRUE
geos_read_hex geos_read_wkb
TRUE TRUE
geos_read_wkt geos_read_xy
TRUE TRUE
geos_relate geos_relate_pattern
TRUE TRUE
geos_relate_pattern_create geos_relate_pattern_match
TRUE TRUE
geos_remove_repeated_points geos_reverse
TRUE TRUE
geos_ring_n geos_segment_intersection
TRUE TRUE
geos_set_precision geos_set_srid
TRUE TRUE
geos_shared_paths geos_simplify
TRUE TRUE
geos_simplify_preserve_topology geos_snap
TRUE TRUE
geos_srid geos_strtree
TRUE TRUE
geos_strtree_data geos_strtree_query
TRUE TRUE
geos_sym_difference geos_sym_difference_prec
TRUE TRUE
geos_touches geos_touches_any
TRUE TRUE
geos_touches_matrix geos_transform_xy
TRUE TRUE
geos_type geos_type_id
TRUE TRUE
geos_unary_union geos_unary_union_prec
TRUE TRUE
geos_union geos_union_prec
TRUE TRUE
geos_unique_points geos_unnest
TRUE TRUE
geos_version geos_voronoi_edges
TRUE TRUE
geos_voronoi_polygons geos_within
TRUE TRUE
geos_within_any geos_within_matrix
TRUE TRUE
geos_write_geojson geos_write_hex
TRUE TRUE
geos_write_wkb geos_write_wkt
TRUE TRUE
geos_write_xy geos_x
TRUE TRUE
geos_xmax geos_xmin
TRUE TRUE
geos_y geos_ymax
TRUE TRUE
geos_ymin geos_z
TRUE TRUE
vec_cast.geos_geometry vec_ptype2.geos_geometry
TRUE TRUE
Examples
There are 29 help pages with examples, from 29 (100.00 %).
NEWS
The package has NEWS file and it is current.
License
The package uses .
Installation environment
System Info
Field | Value |
---|---|
Image | rhub/ref-image |
OS | Ubuntu 24.04.2 LTS |
Platform | x86_64-pc-linux-gnu |
System | x86_64, linux-gnu |
Execution Time | 2025-03-23 03:34:46 UTC |
System information. Table about the system used to check the package.
R Session Info
Information about the R environment and capabilities:
R version 4.4.3 (2025-02-28)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 24.04.2 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.26.so; LAPACK version 3.12.0
locale:
[1] LC_CTYPE=C.UTF-8 LC_NUMERIC=C LC_TIME=C.UTF-8
[4] LC_COLLATE=C.UTF-8 LC_MONETARY=C.UTF-8 LC_MESSAGES=C.UTF-8
[7] LC_PAPER=C.UTF-8 LC_NAME=C LC_ADDRESS=C
[10] LC_TELEPHONE=C LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C
time zone: UTC
tzcode source: system (glibc)
attached base packages:
[1] tools stats graphics grDevices utils datasets methods
[8] base
loaded via a namespace (and not attached):
[1] riskreports_0.0.0.9003 compiler_4.4.3 fastmap_1.2.0
[4] cli_3.6.4 htmltools_0.5.8.1 yaml_2.3.10
[7] rmarkdown_2.29 knitr_1.50 jsonlite_1.9.1
[10] xfun_0.51 digest_0.6.37 rlang_1.1.5
[13] evaluate_1.0.3
Platform used:
OS.type file.sep dynlib.ext GUI endian pkgType path.sep
"unix" "/" ".so" "X11" "little" "source" ":"
r_arch
""
R’s capabilities:
jpeg png tiff tcltk X11 aqua
TRUE TRUE TRUE TRUE FALSE FALSE
http/ftp sockets libxml fifo cledit iconv
TRUE TRUE FALSE TRUE FALSE TRUE
NLS Rprof profmem cairo ICU long.double
TRUE TRUE TRUE TRUE TRUE TRUE
libcurl
TRUE
External software:
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bzlib
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xz
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PCRE
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iconv
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readline
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BLAS
"/usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3"
Graphics external software:
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"1.18.0" "" "1.52.1"
libpng jpeg libtiff
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Numerical characteristics of the machine:
double.eps double.neg.eps double.xmin
2.220446e-16 1.110223e-16 2.225074e-308
double.xmax double.base double.digits
1.797693e+308 2.000000e+00 5.300000e+01
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double.neg.ulp.digits double.exponent double.min.exp
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double.max.exp integer.max sizeof.long
1.024000e+03 2.147484e+09 8.000000e+00
sizeof.longlong sizeof.longdouble sizeof.pointer
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sizeof.time_t longdouble.eps longdouble.neg.eps
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longdouble.min.exp longdouble.max.exp
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Random number generation process:
[1] "Mersenne-Twister" "Inversion" "Rejection"
Information about the environment
Environmental and options variables affect how package checks and software in it might behave. Here is the environmental variables when running this report
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PERFLOG_LOCATION_SETTING
RUNNER_PERFLOG
PHARMAPKGS_EXCLUDED_METRICS
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PHARMAPKGS_LIMIT 100
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These are the options set to generate the report:
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[1] 50
$showWarnCalls
[1] FALSE
$str
$str$strict.width
[1] "no"
$str$digits.d
[1] 3
$str$vec.len
[1] 4
$str$list.len
[1] 99
$str$deparse.lines
NULL
$str$drop.deparse.attr
[1] TRUE
$str$formatNum
function (x, ...)
format(x, trim = TRUE, drop0trailing = TRUE, ...)
<environment: 0x5577859dc688>
$str.dendrogram.last
[1] "`"
$texi2dvi
[1] "/usr/bin/texi2dvi"
$tikzMetricsDictionary
[1] "validation_report_geos_v0.2.4-tikzDictionary"
$timeout
[1] 60
$try.outFile
A connection with
description ""
class "file"
mode "w+b"
text "binary"
opened "opened"
can read "yes"
can write "yes"
$ts.eps
[1] 1e-05
$ts.S.compat
[1] FALSE
$unzip
[1] "/usr/bin/unzip"
$useFancyQuotes
[1] FALSE
$verbose
[1] FALSE
$warn
[1] 0
$warning.length
[1] 1000
$warnPartialMatchArgs
[1] FALSE
$warnPartialMatchAttr
[1] FALSE
$warnPartialMatchDollar
[1] FALSE
$width
[1] 80