Validation Report - fastai@2.2.2

Context

This report is fully automated and builds on rhub/ref-image image. Documents the installation of this package on an open source R environment, focusing on:

  • Installation environment description
  • Testing coverage

It is limited to assess whether unit tests and documentation are present and can execute without error. An assessment would be required that the tests and documentation are meaningful.

Package fastai

Metric based risk assessment

The following metrics are derived from the riskmetric R package.

has_news 1
news_current TRUE
exported_namespace 864
has_vignettes 49
export_help 864
has_website TRUE
has_maintainer Turgut Abdullayev
bugs_status subscript out of bounds
has_source_control https://github.com/EagerAI/fastai
has_bug_reports_url 1
downloads_1yr 11709
reverse_dependencies 0
has_examples 0.9989691
dependencies 6
license Apache License 2.0

Package general assessment: Coverage, check results, size, download the last year, reverse dependencies and number of dependencies.

Dependencies

Overall the package has these dependencies:

package type
1 reticulate Imports
2 generics Imports
3 png Imports
4 ggplot2 Imports
5 ggpubr Imports
6 glue Imports

Package dependencies

Reverse dependencies

Overall the package has 0 reverse dependencies:

Namespace

Overall the package has 864 exported objects. 863 are documented:

                                      %f% 
                                    FALSE 
                              AccumMetric 
                                     TRUE 
                                 accuracy 
                                     TRUE 
                           accuracy_multi 
                                     TRUE 
                   accuracy_thresh_expand 
                                     TRUE 
                                     Adam 
                                     TRUE 
                                adam_step 
                                     TRUE 
                            adaptive_pool 
                                     TRUE 
                          AdaptiveAvgPool 
                                     TRUE 
                     AdaptiveConcatPool1d 
                                     TRUE 
                     AdaptiveConcatPool2d 
                                     TRUE 
                      AdaptiveGANSwitcher 
                                     TRUE 
                             AdaptiveLoss 
                                     TRUE 
                      add_cyclic_datepart 
                                     TRUE 
                             add_datepart 
                                     TRUE 
                              AddChannels 
                                     TRUE 
                                 AddNoise 
                                     TRUE 
                             affine_coord 
                                     TRUE 
                               affine_mat 
                                     TRUE 
                           AffineCoordTfm 
                                     TRUE 
                                  alexnet 
                                     TRUE 
                        apply_perspective 
                                     TRUE 
                            APScoreBinary 
                                     TRUE 
                             APScoreMulti 
                                     TRUE 
                            array_reshape 
                                     TRUE 
                                 as_array 
                                     TRUE 
                                   aspect 
                                     TRUE 
                         audio_extensions 
                                     TRUE 
                               AudioBlock 
                                     TRUE 
                   AudioBlock_from_folder 
                                     TRUE 
                              AudioGetter 
                                     TRUE 
                             AudioPadType 
                                     TRUE 
                              AudioTensor 
                                     TRUE 
                       AudioTensor_create 
                                     TRUE 
                              AudioToMFCC 
                                     TRUE 
                     AudioToMFCC_from_cfg 
                                     TRUE 
                     AudioToSpec_from_cfg 
                                     TRUE 
                           aug_transforms 
                                     TRUE 
                               AutoConfig 
                                     TRUE 
                             average_grad 
                                     TRUE 
                         average_sqr_grad 
                                     TRUE 
                                  AvgLoss 
                                     TRUE 
                                  AvgPool 
                                     TRUE 
                            AvgSmoothLoss 
                                     TRUE 
                                 AWD_LSTM 
                                     TRUE 
                      awd_lstm_clas_split 
                                     TRUE 
                        awd_lstm_lm_split 
                                     TRUE 
                                 AWD_QRNN 
                                     TRUE 
                         BalancedAccuracy 
                                     TRUE 
                                 BaseLoss 
                                     TRUE 
                            BaseTokenizer 
                                     TRUE 
                             basic_critic 
                                     TRUE 
                          basic_generator 
                                     TRUE 
                      BasicMelSpectrogram 
                                     TRUE 
                                BasicMFCC 
                                     TRUE 
                         BasicSpectrogram 
                                     TRUE 
                                BatchNorm 
                                     TRUE 
                          BatchNorm1dFlat 
                                     TRUE 
                                   bb_pad 
                                     TRUE 
                                BBoxBlock 
                                     TRUE 
                              BBoxLabeler 
                                     TRUE 
                             BBoxLblBlock 
                                     TRUE 
                              BCELossFlat 
                                     TRUE 
                    BCEWithLogitsLossFlat 
                                     TRUE 
                               BrierScore 
                                     TRUE 
                          BrierScoreMulti 
                                     TRUE 
                                  bs_find 
                                     TRUE 
                          calculate_rouge 
                                     TRUE 
                                 Callback 
                                     TRUE 
                           capture.output 
                                     TRUE 
                                      Cat 
                                     TRUE 
                           catalyst_model 
                                     TRUE 
                               Categorify 
                                     TRUE 
                            CategoryBlock 
                                     TRUE 
                             ChangeVolume 
                                     TRUE 
                  children_and_parameters 
                                     TRUE 
ClassificationInterpretation_from_learner 
                                     TRUE 
                           clean_raw_keys 
                                     TRUE 
                        clip_remove_empty 
                                     TRUE 
                                       cm 
                                     TRUE 
                               cnn_config 
                                     TRUE 
                              cnn_learner 
                                     TRUE 
                               COCOMetric 
                                     TRUE 
                           COCOMetricType 
                                     TRUE 
                               CohenKappa 
                                     TRUE 
                           collab_learner 
                                     TRUE 
            CollabDataLoaders_from_dblock 
                                     TRUE 
                CollabDataLoaders_from_df 
                                     TRUE 
                      CollectDataCallback 
                                     TRUE 
                                   colors 
                                     TRUE 
                                ColReader 
                                     TRUE 
                              ColSplitter 
                                     TRUE 
                     combined_flat_anneal 
                                     TRUE 
                competition_download_file 
                                     TRUE 
               competition_download_files 
                                     TRUE 
         competition_leaderboard_download 
                                     TRUE 
                   competition_list_files 
                                     TRUE 
                       competition_submit 
                                     TRUE 
                        competitions_list 
                                     TRUE 
                                 Contrast 
                                     TRUE 
                             conv_norm_lr 
                                     TRUE 
                                ConvLayer 
                                     TRUE 
                          convT_norm_relu 
                                     TRUE 
                         CorpusBLEUMetric 
                                     TRUE 
                               crappifier 
                                     TRUE 
                              create_body 
                                     TRUE 
                         create_cnn_model 
                                     TRUE 
                               create_fcn 
                                     TRUE 
                              create_head 
                                     TRUE 
                         create_inception 
                                     TRUE 
                               create_mlp 
                                     TRUE 
                            create_resnet 
                                     TRUE 
                        create_unet_model 
                                     TRUE 
                                  CropPad 
                                     TRUE 
                                 CropTime 
                                     TRUE 
                     CrossEntropyLossFlat 
                                     TRUE 
                                CSVLogger 
                                     TRUE 
                             CudaCallback 
                                     TRUE 
                                   CutMix 
                                     TRUE 
                          cutout_gaussian 
                                     TRUE 
                            cycle_learner 
                                     TRUE 
                                 CycleGAN 
                                     TRUE 
                             CycleGANLoss 
                                     TRUE 
                             Data_Loaders 
                                     TRUE 
                                DataBlock 
                                     TRUE 
                              dataloaders 
                                     TRUE 
                                 Datasets 
                                     TRUE 
                                  dcmread 
                                     TRUE 
                                   debias 
                                     TRUE 
                                 Debugger 
                                     TRUE 
                            decision_plot 
                                     TRUE 
                       decode_spec_tokens 
                                     TRUE 
                            default_split 
                                     TRUE 
                                    Delta 
                                     TRUE 
                     denormalize_imagenet 
                                     TRUE 
                              densenet121 
                                     TRUE 
                              densenet161 
                                     TRUE 
                              densenet169 
                                     TRUE 
                              densenet201 
                                     TRUE 
                            DenseResBlock 
                                     TRUE 
                          dependence_plot 
                                     TRUE 
                    DeterministicDihedral 
                                     TRUE 
                        DeterministicDraw 
                                     TRUE 
                        DeterministicFlip 
                                     TRUE 
                             detuplify_pg 
                                     TRUE 
                                  dev.off 
                                     TRUE 
                                     Dice 
                                     TRUE 
                                    Dicom 
                                     TRUE 
                            dicom_windows 
                                     TRUE 
                                 Dihedral 
                                     TRUE 
                             dihedral_mat 
                                     TRUE 
                             DihedralItem 
                                     TRUE 
                            discriminator 
                                     TRUE 
                            download.file 
                                     TRUE 
                              DownmixMono 
                                     TRUE 
                             dropout_mask 
                                     TRUE 
                               dummy_eval 
                                     TRUE 
                              DynamicUnet 
                                     TRUE 
                    EarlyStoppingCallback 
                                     TRUE 
                    efficientdet_infer_dl 
                                     TRUE 
                     efficientdet_learner 
                                     TRUE 
                       efficientdet_model 
                                     TRUE 
                  efficientdet_predict_dl 
                                     TRUE 
                    efficientdet_train_dl 
                                     TRUE 
                    efficientdet_valid_dl 
                                     TRUE 
                              emb_sz_rule 
                                     TRUE 
                                Embedding 
                                     TRUE 
                         EmbeddingDropout 
                                     TRUE 
                               error_rate 
                                     TRUE 
                                exp_rmspe 
                                     TRUE 
                        ExplainedVariance 
                                     TRUE 
                         export_generator 
                                     TRUE 
                                  F1Score 
                                     TRUE 
                             F1ScoreMulti 
                                     TRUE 
                               fa_collate 
                                     TRUE 
                               fa_convert 
                                     TRUE 
                           fastai_version 
                                     TRUE 
                     faster_rcnn_infer_dl 
                                     TRUE 
                      faster_rcnn_learner 
                                     TRUE 
                        faster_rcnn_model 
                                     TRUE 
                   faster_rcnn_predict_dl 
                                     TRUE 
                     faster_rcnn_train_dl 
                                     TRUE 
                     faster_rcnn_valid_dl 
                                     TRUE 
                                    FBeta 
                                     TRUE 
                               FBetaMulti 
                                     TRUE 
                       FetchPredsCallback 
                                     TRUE 
                             FileSplitter 
                                     TRUE 
                              FillMissing 
                                     TRUE 
                      FillStrategy_COMMON 
                                     TRUE 
                    FillStrategy_CONSTANT 
                                     TRUE 
                      FillStrategy_MEDIAN 
                                     TRUE 
                              find_coeffs 
                                     TRUE 
                                fine_tune 
                                     TRUE 
                                      fit 
                                     TRUE 
                             fit_flat_cos 
                                     TRUE 
                             fit_flat_lin 
                                     TRUE 
                            fit_one_cycle 
                                     TRUE 
                                 fit_sgdr 
                                     TRUE 
                                  fix_fit 
                                     TRUE 
                                 fix_html 
                                     TRUE 
                         FixedGANSwitcher 
                                     TRUE 
                                  Flatten 
                                     TRUE 
                            flatten_check 
                                     TRUE 
                            flatten_model 
                                     TRUE 
                                     Flip 
                                     TRUE 
                                 flip_mat 
                                     TRUE 
                                 FlipItem 
                                     TRUE 
                                    float 
                                     TRUE 
                            FolderDataset 
                                     TRUE 
                               force_plot 
                                     TRUE 
                           foreground_acc 
                                     TRUE 
                          forget_mult_CPU 
                                     TRUE 
                            ForgetMultGPU 
                                     TRUE 
                                   freeze 
                                     TRUE 
                             FuncSplitter 
                                     TRUE 
                                    fView 
                                     TRUE 
                               gan_critic 
                                     TRUE 
                       gan_loss_from_func 
                                     TRUE 
                      GANDiscriminativeLR 
                                     TRUE 
                 GANLearner_from_learners 
                                     TRUE 
                          GANLearner_wgan 
                                     TRUE 
                                  GANLoss 
                                     TRUE 
                                GANModule 
                                     TRUE 
                               GANTrainer 
                                     TRUE 
                      GatherPredsCallback 
                                     TRUE 
                             gauss_blur2d 
                                     TRUE 
                           generate_noise 
                                     TRUE 
                          get_annotations 
                                     TRUE 
                          get_audio_files 
                                     TRUE 
                                 get_bias 
                                     TRUE 
                                    get_c 
                                     TRUE 
                     get_confusion_matrix 
                                     TRUE 
                         get_data_loaders 
                                     TRUE 
                           get_dcm_matrix 
                                     TRUE 
                          get_dicom_files 
                                     TRUE 
                                  get_dls 
                                     TRUE 
                               get_emb_sz 
                                     TRUE 
                                get_files 
                                     TRUE 
                                 get_grid 
                                     TRUE 
                           get_hf_objects 
                                     TRUE 
                          get_image_files 
                                     TRUE 
                       get_language_model 
                                     TRUE 
                       get_preds_cyclegan 
                                     TRUE 
                      get_text_classifier 
                                     TRUE 
                           get_text_files 
                                     TRUE 
                              get_weights 
                                     TRUE 
                     GradientAccumulation 
                                     TRUE 
                      GrandparentSplitter 
                                     TRUE 
                                grayscale 
                                     TRUE 
                              HammingLoss 
                                     TRUE 
                         HammingLossMulti 
                                     TRUE 
                               has_params 
                                     TRUE 
                            has_pool_type 
                                     TRUE 
                                   helper 
                                     TRUE 
                         HF_ARCHITECTURES 
                                     TRUE 
                             HF_BaseInput 
                                     TRUE 
                     HF_BaseModelCallback 
                                     TRUE 
                      HF_BaseModelWrapper 
                                     TRUE 
                  HF_BeforeBatchTransform 
                                     TRUE 
          HF_CausalLMBeforeBatchTransform 
                                     TRUE 
                          HF_load_dataset 
                                     TRUE 
                      HF_QABatchTransform 
                                     TRUE 
                HF_QABeforeBatchTransform 
                                     TRUE 
                HF_QstAndAnsModelCallback 
                                     TRUE 
                   HF_QuestionAnswerInput 
                                     TRUE 
                              hf_splitter 
                                     TRUE 
     HF_SummarizationBeforeBatchTransform 
                                     TRUE 
                    HF_SummarizationInput 
                                     TRUE 
            HF_SummarizationModelCallback 
                                     TRUE 
                             HF_TASKS_ALL 
                                     TRUE 
                            HF_TASKS_AUTO 
                                     TRUE 
          HF_Text2TextAfterBatchTransform 
                                     TRUE 
                        HF_Text2TextBlock 
                                     TRUE 
                             HF_TextBlock 
                                     TRUE 
                       HF_TokenCategorize 
                                     TRUE 
                    HF_TokenCategoryBlock 
                                     TRUE 
        HF_TokenClassBeforeBatchTransform 
                                     TRUE 
                       HF_TokenClassInput 
                                     TRUE 
                   HF_TokenTensorCategory 
                                     TRUE 
                                     Hook 
                                     TRUE 
                              hook_output 
                                     TRUE 
                             hook_outputs 
                                     TRUE 
                             HookCallback 
                                     TRUE 
                                    Hooks 
                                     TRUE 
                                  hsv2rgb 
                                     TRUE 
                                      Hue 
                                     TRUE 
                        icevision_Adapter 
                                     TRUE 
                       icevision_aug_tfms 
                                     TRUE 
              icevision_BasicIAATransform 
                                     TRUE 
                 icevision_BasicTransform 
                                     TRUE 
                           icevision_Blur 
                                     TRUE 
                 icevision_ChannelDropout 
                                     TRUE 
                 icevision_ChannelShuffle 
                                     TRUE 
                          icevision_CLAHE 
                                     TRUE 
                       icevision_ClassMap 
                                     TRUE 
                  icevision_CoarseDropout 
                                     TRUE 
                    icevision_ColorJitter 
                                     TRUE 
                        icevision_Compose 
                                     TRUE 
                           icevision_Crop 
                                     TRUE 
       icevision_CropNonEmptyMaskIfExists 
                                     TRUE 
                         icevision_Cutout 
                                     TRUE 
                        icevision_Dataset 
                                     TRUE 
            icevision_Dataset_from_images 
                                     TRUE 
                      icevision_Downscale 
                                     TRUE 
               icevision_DualIAATransform 
                                     TRUE 
                  icevision_DualTransform 
                                     TRUE 
               icevision_ElasticTransform 
                                     TRUE 
                       icevision_Equalize 
                                     TRUE 
                       icevision_FancyPCA 
                                     TRUE 
                            icevision_FDA 
                                     TRUE 
                  icevision_FixedSplitter 
                                     TRUE 
                           icevision_Flip 
                                     TRUE 
                      icevision_FromFloat 
                                     TRUE 
                   icevision_GaussianBlur 
                                     TRUE 
                     icevision_GaussNoise 
                                     TRUE 
                      icevision_GlassBlur 
                                     TRUE 
                 icevision_GridDistortion 
                                     TRUE 
                    icevision_GridDropout 
                                     TRUE 
              icevision_HistogramMatching 
                                     TRUE 
                 icevision_HorizontalFlip 
                                     TRUE 
             icevision_HueSaturationValue 
                                     TRUE 
       icevision_IAAAdditiveGaussianNoise 
                                     TRUE 
                      icevision_IAAAffine 
                                     TRUE 
                  icevision_IAACropAndPad 
                                     TRUE 
                      icevision_IAAEmboss 
                                     TRUE 
                      icevision_IAAFliplr 
                                     TRUE 
                      icevision_IAAFlipud 
                                     TRUE 
                 icevision_IAAPerspective 
                                     TRUE 
             icevision_IAAPiecewiseAffine 
                                     TRUE 
                     icevision_IAASharpen 
                                     TRUE 
                 icevision_IAASuperpixels 
                                     TRUE 
               icevision_ImageCompression 
                                     TRUE 
          icevision_ImageOnlyIAATransform 
                                     TRUE 
             icevision_ImageOnlyTransform 
                                     TRUE 
                      icevision_InvertImg 
                                     TRUE 
                       icevision_ISONoise 
                                     TRUE 
                icevision_JpegCompression 
                                     TRUE 
                 icevision_LongestMaxSize 
                                     TRUE 
                    icevision_MaskDropout 
                                     TRUE 
                     icevision_MedianBlur 
                                     TRUE 
                     icevision_MotionBlur 
                                     TRUE 
            icevision_MultiplicativeNoise 
                                     TRUE 
                      icevision_Normalize 
                                     TRUE 
              icevision_OpticalDistortion 
                                     TRUE 
                    icevision_PadIfNeeded 
                                     TRUE 
                          icevision_parse 
                                     TRUE 
                      icevision_Posterize 
                                     TRUE 
       icevision_RandomBrightnessContrast 
                                     TRUE 
                 icevision_RandomContrast 
                                     TRUE 
                     icevision_RandomCrop 
                                     TRUE 
             icevision_RandomCropNearBBox 
                                     TRUE 
                      icevision_RandomFog 
                                     TRUE 
                    icevision_RandomGamma 
                                     TRUE 
              icevision_RandomGridShuffle 
                                     TRUE 
                     icevision_RandomRain 
                                     TRUE 
              icevision_RandomResizedCrop 
                                     TRUE 
                 icevision_RandomRotate90 
                                     TRUE 
                    icevision_RandomScale 
                                     TRUE 
                   icevision_RandomShadow 
                                     TRUE 
        icevision_RandomSizedBBoxSafeCrop 
                                     TRUE 
                icevision_RandomSizedCrop 
                                     TRUE 
                     icevision_RandomSnow 
                                     TRUE 
                 icevision_RandomSplitter 
                                     TRUE 
                 icevision_RandomSunFlare 
                                     TRUE 
                 icevision_read_bgr_image 
                                     TRUE 
                 icevision_read_rgb_image 
                                     TRUE 
                         icevision_Resize 
                                     TRUE 
                 icevision_resize_and_pad 
                                     TRUE 
                       icevision_RGBShift 
                                     TRUE 
                         icevision_Rotate 
                                     TRUE 
               icevision_ShiftScaleRotate 
                                     TRUE 
            icevision_SingleSplitSplitter 
                                     TRUE 
                icevision_SmallestMaxSize 
                                     TRUE 
                       icevision_Solarize 
                                     TRUE 
                        icevision_ToFloat 
                                     TRUE 
                         icevision_ToGray 
                                     TRUE 
                        icevision_ToSepia 
                                     TRUE 
                      icevision_Transpose 
                                     TRUE 
                   icevision_VerticalFlip 
                                     TRUE 
                                icnr_init 
                                     TRUE 
                                    IDMap 
                                     TRUE 
                                    Image 
                                     TRUE 
                             Image_create 
                                     TRUE 
                               Image_open 
                                     TRUE 
                             Image_resize 
                                     TRUE 
                             image2tensor 
                                     TRUE 
                               ImageBlock 
                                     TRUE 
                           ImageBW_create 
                                     TRUE 
                ImageDataLoaders_from_csv 
                                     TRUE 
             ImageDataLoaders_from_dblock 
                                     TRUE 
                 ImageDataLoaders_from_df 
                                     TRUE 
             ImageDataLoaders_from_folder 
                                     TRUE 
              ImageDataLoaders_from_lists 
                                     TRUE 
            ImageDataLoaders_from_name_re 
                                     TRUE 
          ImageDataLoaders_from_path_func 
                                     TRUE 
            ImageDataLoaders_from_path_re 
                                     TRUE 
                           imagenet_stats 
                                     TRUE 
                              in_channels 
                                     TRUE 
                          InceptionModule 
                                     TRUE 
                            IndexSplitter 
                                     TRUE 
                                     init 
                                     TRUE 
                             init_default 
                                     TRUE 
                              init_linear 
                                     TRUE 
                           install_fastai 
                                     TRUE 
                             InstanceNorm 
                                     TRUE 
                         IntToFloatTensor 
                                     TRUE 
                          InvisibleTensor 
                                     TRUE 
                             is_rmarkdown 
                                     TRUE 
                                  Jaccard 
                                     TRUE 
                             JaccardCoeff 
                                     TRUE 
                             JaccardMulti 
                                     TRUE 
                                       kg 
                                     TRUE 
                                        L 
                                     TRUE 
                               L1LossFlat 
                                     TRUE 
                                   l2_reg 
                                     TRUE 
                              LabeledBBox 
                                     TRUE 
               LabelSmoothingCrossEntropy 
                                     TRUE 
           LabelSmoothingCrossEntropyFlat 
                                     TRUE 
                                     Lamb 
                                     TRUE 
                                lamb_step 
                                     TRUE 
                                   Lambda 
                                     TRUE 
                   language_model_learner 
                                     TRUE 
                                     Larc 
                                     TRUE 
                            larc_layer_lr 
                                     TRUE 
                                larc_step 
                                     TRUE 
                               layer_info 
                                     TRUE 
                                  Learner 
                                     TRUE 
                              LightingTfm 
                                     TRUE 
                                LinBnDrop 
                                     TRUE 
                            LinearDecoder 
                                     TRUE 
                                 LitModel 
                                     TRUE 
                             LMDataLoader 
                                     TRUE 
                                LMLearner 
                                     TRUE 
                        LMLearner_predict 
                                     TRUE 
                             load_dataset 
                                     TRUE 
                         load_ignore_keys 
                                     TRUE 
                               load_image 
                                     TRUE 
                             load_learner 
                                     TRUE 
                          load_model_text 
                                     TRUE 
                       load_tokenized_csv 
                                     TRUE 
                                  loaders 
                                     TRUE 
                                    login 
                                     TRUE 
                                Lookahead 
                                     TRUE 
                               LossMetric 
                                     TRUE 
                                  lr_find 
                                     TRUE 
                                      mae 
                                     TRUE 
                               make_vocab 
                                     TRUE 
                              Mask_create 
                                     TRUE 
                           mask_from_blur 
                                     TRUE 
                       mask_rcnn_infer_dl 
                                     TRUE 
                        mask_rcnn_learner 
                                     TRUE 
                          mask_rcnn_model 
                                     TRUE 
                     mask_rcnn_predict_dl 
                                     TRUE 
                       mask_rcnn_train_dl 
                                     TRUE 
                       mask_rcnn_valid_dl 
                                     TRUE 
                              mask_tensor 
                                     TRUE 
                                mask2bbox 
                                     TRUE 
                                MaskBlock 
                                     TRUE 
                       masked_concat_pool 
                                     TRUE 
                                 MaskFreq 
                                     TRUE 
                                 MaskTime 
                                     TRUE 
                             match_embeds 
                                     TRUE 
                         MatthewsCorrCoef 
                                     TRUE 
                    MatthewsCorrCoefMulti 
                                     TRUE 
                                  MaxPool 
                                     TRUE 
                          maybe_unsqueeze 
                                     TRUE 
                        MCDropoutCallback 
                                     TRUE 
                                   median 
                                     TRUE 
                               MergeLayer 
                                     TRUE 
                                     mish 
                                     TRUE 
                                    Mish_ 
                                     TRUE 
                            MishJitAutoFn 
                                     TRUE 
                               MixHandler 
                                     TRUE 
                                    MixUp 
                                     TRUE 
                              model_sizes 
                                     TRUE 
                            ModelResetter 
                                     TRUE 
                                   Module 
                                     TRUE 
                            momentum_step 
                                     TRUE 
                            most_confused 
                                     TRUE 
                                      mse 
                                     TRUE 
                              MSELossFlat 
                                     TRUE 
                                     msle 
                                     TRUE 
                          MultiCategorize 
                                     TRUE 
                       MultiCategoryBlock 
                                     TRUE 
                          MultiTargetLoss 
                                     TRUE 
                                     n_px 
                                     TRUE 
                                   narrow 
                                     TRUE 
                                      Net 
                                     TRUE 
                                       nn 
                                     TRUE 
                                  nn_loss 
                                     TRUE 
                                nn_module 
                                     TRUE 
                               NoiseColor 
                                     TRUE 
                               NoneReduce 
                                     TRUE 
                                     noop 
                                     TRUE 
                        norm_apply_denorm 
                                     TRUE 
                                Normalize 
                                     TRUE 
                     Normalize_from_stats 
                                     TRUE 
                              NormalizeTS 
                                     TRUE 
                       num_features_model 
                                     TRUE 
                             Numericalize 
                                     TRUE 
                            OldRandomCrop 
                                     TRUE 
                                one_batch 
                                     TRUE 
                                OpenAudio 
                                     TRUE 
                             optim_metric 
                                     TRUE 
                                Optimizer 
                                     TRUE 
                             OptimWrapper 
                                     TRUE 
                                       os 
                                     TRUE 
                           os_environ_tpu 
                                     TRUE 
                       pad_conv_norm_relu 
                                     TRUE 
                                pad_input 
                                     TRUE 
                          pad_input_chunk 
                                     TRUE 
                                 parallel 
                                     TRUE 
                        parallel_tokenize 
                                     TRUE 
                                   params 
                                     TRUE 
                           ParamScheduler 
                                     TRUE 
                             parent_label 
                                     TRUE 
                       parsers_AreasMixin 
                                     TRUE 
                      parsers_BBoxesMixin 
                                     TRUE 
                       parsers_FasterRCNN 
                                     TRUE 
                    parsers_FilepathMixin 
                                     TRUE 
                     parsers_ImageidMixin 
                                     TRUE 
                    parsers_IsCrowdsMixin 
                                     TRUE 
                      parsers_LabelsMixin 
                                     TRUE 
                         parsers_MaskRCNN 
                                     TRUE 
                       parsers_MasksMixin 
                                     TRUE 
                        parsers_SizeMixin 
                                     TRUE 
                              parsers_voc 
                                     TRUE 
                                  partial 
                                     TRUE 
                                PartialDL 
                                     TRUE 
                            PartialLambda 
                                     TRUE 
                                      pca 
                                     TRUE 
                          PearsonCorrCoef 
                                     TRUE 
                               Perplexity 
                                     TRUE 
                                 Pipeline 
                                     TRUE 
                        PixelShuffle_ICNR 
                                     TRUE 
                                     plot 
                                     TRUE 
                             plot_bs_find 
                                     TRUE 
                    plot_confusion_matrix 
                                     TRUE 
                                plot_loss 
                                     TRUE 
                             plot_lr_find 
                                     TRUE 
                          plot_top_losses 
                                     TRUE 
                               PointBlock 
                                     TRUE 
                              PointScaler 
                                     TRUE 
                    PooledSelfAttention2d 
                                     TRUE 
                              PoolFlatten 
                                     TRUE 
                  PoolingLinearClassifier 
                                     TRUE 
                        pre_process_squad 
                                     TRUE 
                                Precision 
                                     TRUE 
                           PrecisionMulti 
                                     TRUE 
                                  predict 
                                     TRUE 
                               preplexity 
                                     TRUE 
                  preprocess_audio_folder 
                                     TRUE 
                          PreprocessAudio 
                                     TRUE 
                                 py_apply 
                                     TRUE 
                           py_load_object 
                                     TRUE 
                                  PyClass 
                                     TRUE 
                                   QHAdam 
                                     TRUE 
                              qhadam_step 
                                     TRUE 
                                     QRNN 
                                     TRUE 
                                QRNNLayer 
                                     TRUE 
                                  R2Score 
                                     TRUE 
                                    RAdam 
                                     TRUE 
                               radam_step 
                                     TRUE 
                               RandomCrop 
                                     TRUE 
                            RandomErasing 
                                     TRUE 
                        RandomResizedCrop 
                                     TRUE 
                     RandomResizedCropGPU 
                                     TRUE 
                           RandomSplitter 
                                     TRUE 
                                 RandPair 
                                     TRUE 
                            RandTransform 
                                     TRUE 
                                   ranger 
                                     TRUE 
                              RatioResize 
                                     TRUE 
                              ReadTSBatch 
                                     TRUE 
                                   Recall 
                                     TRUE 
                              RecallMulti 
                                     TRUE 
                        ReduceLROnPlateau 
                                     TRUE 
                          RegressionBlock 
                                     TRUE 
                            RemoveSilence 
                                     TRUE 
                               RemoveType 
                                     TRUE 
                         replace_all_caps 
                                     TRUE 
                              replace_maj 
                                     TRUE 
                              replace_rep 
                                     TRUE 
                             replace_wrep 
                                     TRUE 
                             res_block_1d 
                                     TRUE 
                                 Resample 
                                     TRUE 
                                 ResBlock 
                                     TRUE 
                                  reshape 
                                     TRUE 
                                   Resize 
                                     TRUE 
                               resize_max 
                                     TRUE 
                              ResizeBatch 
                                     TRUE 
                             ResizeSignal 
                                     TRUE 
                                   ResNet 
                                     TRUE 
                         resnet_generator 
                                     TRUE 
                                resnet101 
                                     TRUE 
                                resnet152 
                                     TRUE 
                                 resnet18 
                                     TRUE 
                                 resnet34 
                                     TRUE 
                                 resnet50 
                                     TRUE 
                              ResnetBlock 
                                     TRUE 
                                RetinaNet 
                                     TRUE 
                       RetinaNetFocalLoss 
                                     TRUE 
                             reverse_text 
                                     TRUE 
                                  rgb2hsv 
                                     TRUE 
                        rm_useless_spaces 
                                     TRUE 
                            rms_prop_step 
                                     TRUE 
                                     rmse 
                                     TRUE 
                                  RMSProp 
                                     TRUE 
                               RNNDropout 
                                     TRUE 
                           RNNRegularizer 
                                     TRUE 
                                   RocAuc 
                                     TRUE 
                             RocAucBinary 
                                     TRUE 
                              RocAucMulti 
                                     TRUE 
                                   Rotate 
                                     TRUE 
                               rotate_mat 
                                     TRUE 
                               Saturation 
                                     TRUE 
                        SaveModelCallback 
                                     TRUE 
                                 SchedCos 
                                     TRUE 
                                 SchedExp 
                                     TRUE 
                                 SchedLin 
                                     TRUE 
                                  SchedNo 
                                     TRUE 
                                SchedPoly 
                                     TRUE 
                                       sd 
                                     TRUE 
                                  SEBlock 
                                     TRUE 
  SegmentationDataLoaders_from_label_func 
                                     TRUE 
                            SelfAttention 
                                     TRUE 
                                 SEModule 
                                     TRUE 
                          SentenceEncoder 
                                     TRUE 
                   SentencePieceTokenizer 
                                     TRUE 
                           SeparableBlock 
                                     TRUE 
                            SequentialRNN 
                                     TRUE 
                           SEResNeXtBlock 
                                     TRUE 
                         set_freeze_model 
                                     TRUE 
                              set_item_pg 
                                     TRUE 
                           setup_aug_tfms 
                                     TRUE 
                                      SGD 
                                     TRUE 
                                 sgd_step 
                                     TRUE 
                                   SGRoll 
                                     TRUE 
                                    shape 
                                     TRUE 
                       ShapInterpretation 
                                     TRUE 
                                 Shortcut 
                                     TRUE 
                       ShortEpochCallback 
                                     TRUE 
                                     show 
                                     TRUE 
                               show_array 
                                     TRUE 
                               show_batch 
                                     TRUE 
                               show_image 
                                     TRUE 
                              show_images 
                                     TRUE 
                               show_preds 
                                     TRUE 
                             show_results 
                                     TRUE 
                             show_samples 
                                     TRUE 
                 ShowCycleGANImgsCallback 
                                     TRUE 
                        ShowGraphCallback 
                                     TRUE 
                                  sigmoid 
                                     TRUE 
                                 sigmoid_ 
                                     TRUE 
                            sigmoid_range 
                                     TRUE 
                             SigmoidRange 
                                     TRUE 
                             SignalCutout 
                                     TRUE 
                               SignalLoss 
                                     TRUE 
                            SignalShifter 
                                     TRUE 
                                SimpleCNN 
                                     TRUE 
                      SimpleSelfAttention 
                                     TRUE 
                            skm_to_fastai 
                                     TRUE 
                                    slice 
                                     TRUE 
                                 SortedDL 
                                     TRUE 
                           SpacyTokenizer 
                                     TRUE 
                         SpearmanCorrCoef 
                                     TRUE 
                          spec_add_spaces 
                                     TRUE 
                   SpectrogramTransformer 
                                     TRUE 
                               SqueezeNet 
                                     TRUE 
                            squeezenet1_0 
                                     TRUE 
                            squeezenet1_1 
                                     TRUE 
                        stack_train_valid 
                                     TRUE 
                                step_stat 
                                     TRUE 
                                 subplots 
                                     TRUE 
                   summarization_splitter 
                                     TRUE 
                             summary_plot 
                                     TRUE 
                                    swish 
                                     TRUE 
                                   Swish_ 
                                     TRUE 
                           tabular_config 
                                     TRUE 
                          tabular_learner 
                                     TRUE 
                         TabularDataTable 
                                     TRUE 
                             TabularModel 
                                     TRUE 
                                TabularTS 
                                     TRUE 
                      TabularTSDataloader 
                                     TRUE 
                  tar_extract_at_filename 
                                     TRUE 
                                   tensor 
                                     TRUE 
                               TensorBBox 
                                     TRUE 
                        TensorBBox_create 
                                     TRUE 
                              TensorImage 
                                     TRUE 
                            TensorImageBW 
                                     TRUE 
                      TensorMultiCategory 
                                     TRUE 
                              TensorPoint 
                                     TRUE 
                       TensorPoint_create 
                                     TRUE 
                   TerminateOnNaNCallback 
                                     TRUE 
                              test_loader 
                                     TRUE 
                  text_classifier_learner 
                                     TRUE 
                                TextBlock 
                                     TRUE 
                        TextBlock_from_df 
                                     TRUE 
                    TextBlock_from_folder 
                                     TRUE 
                 TextDataLoaders_from_csv 
                                     TRUE 
                  TextDataLoaders_from_df 
                                     TRUE 
              TextDataLoaders_from_folder 
                                     TRUE 
                              TextLearner 
                                     TRUE 
                 TextLearner_load_encoder 
                                     TRUE 
              TextLearner_load_pretrained 
                                     TRUE 
                 TextLearner_save_encoder 
                                     TRUE 
                                   TfmdDL 
                                     TRUE 
                                TfmdLists 
                                     TRUE 
                                TfmResize 
                                     TRUE 
                             timm_learner 
                                     TRUE 
                         timm_list_models 
                                     TRUE 
                          to_bytes_format 
                                     TRUE 
                                 to_image 
                                     TRUE 
                                to_matrix 
                                     TRUE 
                                 to_thumb 
                                     TRUE 
                                   to_xla 
                                     TRUE 
                             tokenize_csv 
                                     TRUE 
                              tokenize_df 
                                     TRUE 
                           tokenize_files 
                                     TRUE 
                          tokenize_folder 
                                     TRUE 
                           tokenize_texts 
                                     TRUE 
                                tokenize1 
                                     TRUE 
                                Tokenizer 
                                     TRUE 
                        Tokenizer_from_df 
                                     TRUE 
                        TokenizeWithRules 
                                     TRUE 
                           top_k_accuracy 
                                     TRUE 
                                    torch 
                                     TRUE 
                             total_params 
                                     TRUE 
                                 ToTensor 
                                     TRUE 
                          TrackerCallback 
                                     TRUE 
                             train_loader 
                                     TRUE 
                         trainable_params 
                                     TRUE 
                        TrainEvalCallback 
                                     TRUE 
                                Transform 
                                     TRUE 
                           TransformBlock 
                                     TRUE 
                             transformers 
                                     TRUE 
                   TransformersDropOutput 
                                     TRUE 
                    TransformersTokenizer 
                                     TRUE 
                            trunc_normal_ 
                                     TRUE 
                                  TSBlock 
                                     TRUE 
                   TSDataLoaders_from_dfs 
                                     TRUE 
                              TSDataTable 
                                     TRUE 
                                  TSeries 
                                     TRUE 
                           TSeries_create 
                                     TRUE 
                              unet_config 
                                     TRUE 
                             unet_learner 
                                     TRUE 
                                UnetBlock 
                                     TRUE 
                                 unfreeze 
                                     TRUE 
                           uniform_blur2d 
                                     TRUE 
                        URLs_ADULT_SAMPLE 
                                     TRUE 
                             URLs_AG_NEWS 
                                     TRUE 
             URLs_AMAZON_REVIEWS_POLARITY 
                                     TRUE 
        URLs_AMAZON_REVIEWSAMAZON_REVIEWS 
                                     TRUE 
                      URLs_BIWI_HEAD_POSE 
                                     TRUE 
                         URLs_CALTECH_101 
                                     TRUE 
                              URLs_CAMVID 
                                     TRUE 
                         URLs_CAMVID_TINY 
                                     TRUE 
                                URLs_CARS 
                                     TRUE 
                               URLs_CIFAR 
                                     TRUE 
                           URLs_CIFAR_100 
                                     TRUE 
                           URLs_COCO_TINY 
                                     TRUE 
                        URLs_CUB_200_2011 
                                     TRUE 
                             URLs_DBPEDIA 
                                     TRUE 
                                URLs_DOGS 
                                     TRUE 
                             URLs_FLOWERS 
                                     TRUE 
                                URLs_FOOD 
                                     TRUE 
                       URLs_HORSE_2_ZEBRA 
                                     TRUE 
                       URLs_HUMAN_NUMBERS 
                                     TRUE 
                          URLs_IMAGENETTE 
                                     TRUE 
                      URLs_IMAGENETTE_160 
                                     TRUE 
                      URLs_IMAGENETTE_320 
                                     TRUE 
                           URLs_IMAGEWOOF 
                                     TRUE 
                       URLs_IMAGEWOOF_160 
                                     TRUE 
                       URLs_IMAGEWOOF_320 
                                     TRUE 
                                URLs_IMDB 
                                     TRUE 
                         URLs_IMDB_SAMPLE 
                                     TRUE 
                       URLs_LSUN_BEDROOMS 
                                     TRUE 
                           URLs_ML_SAMPLE 
                                     TRUE 
                               URLs_MNIST 
                                     TRUE 
                        URLs_MNIST_SAMPLE 
                                     TRUE 
                          URLs_MNIST_TINY 
                                     TRUE 
                 URLs_MNIST_VAR_SIZE_TINY 
                                     TRUE 
                  URLs_MOVIE_LENS_ML_100k 
                                     TRUE 
                          URLs_MT_ENG_FRA 
                                     TRUE 
                  URLs_OPENAI_TRANSFORMER 
                                     TRUE 
                         URLs_PASCAL_2007 
                                     TRUE 
                         URLs_PASCAL_2012 
                                     TRUE 
                                URLs_PETS 
                                     TRUE 
                       URLs_PLANET_SAMPLE 
                                     TRUE 
                         URLs_PLANET_TINY 
                                     TRUE 
                             URLs_S3_COCO 
                                     TRUE 
                            URLs_S3_IMAGE 
                                     TRUE 
                         URLs_S3_IMAGELOC 
                                     TRUE 
                            URLs_S3_MODEL 
                                     TRUE 
                              URLs_S3_NLP 
                                     TRUE 
                          URLs_SIIM_SMALL 
                                     TRUE 
                         URLs_SKIN_LESION 
                                     TRUE 
                          URLs_SOGOU_NEWS 
                                     TRUE 
                          URLs_SPEAKERS10 
                                     TRUE 
                      URLs_SPEECHCOMMANDS 
                                     TRUE 
                            URLs_WIKITEXT 
                                     TRUE 
                       URLs_WIKITEXT_TINY 
                                     TRUE 
                           URLs_WT103_BWD 
                                     TRUE 
                           URLs_WT103_FWD 
                                     TRUE 
                       URLs_YAHOO_ANSWERS 
                                     TRUE 
                        URLs_YELP_REVIEWS 
                                     TRUE 
               URLs_YELP_REVIEWS_POLARITY 
                                     TRUE 
                                 vgg11_bn 
                                     TRUE 
                                 vgg13_bn 
                                     TRUE 
                                 vgg16_bn 
                                     TRUE 
                                 vgg19_bn 
                                     TRUE 
                              vleaky_relu 
                                     TRUE 
                                    Voice 
                                     TRUE 
                            WandbCallback 
                                     TRUE 
                                     Warp 
                                     TRUE 
                           waterfall_plot 
                                     TRUE 
                             weight_decay 
                                     TRUE 
                            WeightDropout 
                                     TRUE 
                               WeightedDL 
                                     TRUE 
                        win_abdoment_soft 
                                     TRUE 
                                win_brain 
                                     TRUE 
                           win_brain_bone 
                                     TRUE 
                           win_brain_soft 
                                     TRUE 
                                win_liver 
                                     TRUE 
                                win_lungs 
                                     TRUE 
                          win_mediastinum 
                                     TRUE 
                           win_spine_bone 
                                     TRUE 
                           win_spine_soft 
                                     TRUE 
                               win_stroke 
                                     TRUE 
                             win_subdural 
                                     TRUE 
                                  XResNet 
                                     TRUE 
                               xresnet101 
                                     TRUE 
                               xresnet152 
                                     TRUE 
                                xresnet18 
                                     TRUE 
                           xresnet18_deep 
                                     TRUE 
                         xresnet18_deeper 
                                     TRUE 
                                xresnet34 
                                     TRUE 
                           xresnet34_deep 
                                     TRUE 
                         xresnet34_deeper 
                                     TRUE 
                                xresnet50 
                                     TRUE 
                           xresnet50_deep 
                                     TRUE 
                         xresnet50_deeper 
                                     TRUE 
                              xresnext101 
                                     TRUE 
                               xresnext18 
                                     TRUE 
                               xresnext34 
                                     TRUE 
                               xresnext50 
                                     TRUE 
                            xse_resnet101 
                                     TRUE 
                            xse_resnet152 
                                     TRUE 
                             xse_resnet18 
                                     TRUE 
                             xse_resnet34 
                                     TRUE 
                             xse_resnet50 
                                     TRUE 
                           xse_resnext101 
                                     TRUE 
                            xse_resnext18 
                                     TRUE 
                       xse_resnext18_deep 
                                     TRUE 
                     xse_resnext18_deeper 
                                     TRUE 
                            xse_resnext34 
                                     TRUE 
                       xse_resnext34_deep 
                                     TRUE 
                     xse_resnext34_deeper 
                                     TRUE 
                            xse_resnext50 
                                     TRUE 
                       xse_resnext50_deep 
                                     TRUE 
                     xse_resnext50_deeper 
                                     TRUE 
                                xsenet154 
                                     TRUE 
                                     zoom 
                                     TRUE 
                                    Zoom_ 
                                     TRUE 
                                 zoom_mat 
                                     TRUE 

Examples

There are 969 help pages with examples, from 970 (99.90 %).

NEWS

The package has NEWS file and it is current.

License

The package uses .

Installation environment

System Info

Field Value
Image rhub/ref-image
OS Ubuntu 24.04.1 LTS
Platform x86_64-pc-linux-gnu
System x86_64, linux-gnu
Execution Time 2025-02-19 05:14:34 UTC

System information. Table about the system used to check the package.

R Session Info

Information about the R environment and capabilities:

R version 4.4.2 (2024-10-31)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 24.04.1 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.26.so;  LAPACK version 3.12.0

locale:
 [1] LC_CTYPE=C.UTF-8       LC_NUMERIC=C           LC_TIME=C.UTF-8       
 [4] LC_COLLATE=C.UTF-8     LC_MONETARY=C.UTF-8    LC_MESSAGES=C.UTF-8   
 [7] LC_PAPER=C.UTF-8       LC_NAME=C              LC_ADDRESS=C          
[10] LC_TELEPHONE=C         LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C   

time zone: UTC
tzcode source: system (glibc)

attached base packages:
[1] tools     stats     graphics  grDevices utils     datasets  methods  
[8] base     

loaded via a namespace (and not attached):
 [1] riskreports_0.0.0.9003 compiler_4.4.2         fastmap_1.2.0         
 [4] cli_3.6.4              htmltools_0.5.8.1      yaml_2.3.10           
 [7] rmarkdown_2.29         knitr_1.49             jsonlite_1.8.9        
[10] xfun_0.50              digest_0.6.37          rlang_1.1.5           
[13] evaluate_1.0.3        

Platform used:

   OS.type   file.sep dynlib.ext        GUI     endian    pkgType   path.sep 
    "unix"        "/"      ".so"      "X11"   "little"   "source"        ":" 
    r_arch 
        "" 

R’s capabilities:

       jpeg         png        tiff       tcltk         X11        aqua 
       TRUE        TRUE        TRUE        TRUE       FALSE       FALSE 
   http/ftp     sockets      libxml        fifo      cledit       iconv 
       TRUE        TRUE       FALSE        TRUE       FALSE        TRUE 
        NLS       Rprof     profmem       cairo         ICU long.double 
       TRUE        TRUE        TRUE        TRUE        TRUE        TRUE 
    libcurl 
       TRUE 

External software:

                                                     zlib 
                                                    "1.3" 
                                                    bzlib 
                                     "1.0.8, 13-Jul-2019" 
                                                       xz 
                                                  "5.4.5" 
                                               libdeflate 
                                                   "1.19" 
                                                     PCRE 
                                       "10.42 2022-12-11" 
                                                      ICU 
                                                   "74.2" 
                                                      TRE 
                                "TRE 0.8.0 R_fixes (BSD)" 
                                                    iconv 
                                             "glibc 2.39" 
                                                 readline 
                                                    "8.2" 
                                                     BLAS 
"/usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3" 

Graphics external software:

                   cairo                  cairoFT                    pango 
                "1.18.0"                       ""                 "1.52.1" 
                  libpng                     jpeg                  libtiff 
                "1.6.43"                    "8.0" "LIBTIFF, Version 4.5.1" 

Numerical characteristics of the machine:

               double.eps            double.neg.eps               double.xmin 
             2.220446e-16              1.110223e-16             2.225074e-308 
              double.xmax               double.base             double.digits 
            1.797693e+308              2.000000e+00              5.300000e+01 
          double.rounding              double.guard         double.ulp.digits 
             5.000000e+00              0.000000e+00             -5.200000e+01 
    double.neg.ulp.digits           double.exponent            double.min.exp 
            -5.300000e+01              1.100000e+01             -1.022000e+03 
           double.max.exp               integer.max               sizeof.long 
             1.024000e+03              2.147484e+09              8.000000e+00 
          sizeof.longlong         sizeof.longdouble            sizeof.pointer 
             8.000000e+00              1.600000e+01              8.000000e+00 
            sizeof.time_t            longdouble.eps        longdouble.neg.eps 
             8.000000e+00              1.084202e-19              5.421011e-20 
        longdouble.digits       longdouble.rounding          longdouble.guard 
             6.400000e+01              5.000000e+00              0.000000e+00 
    longdouble.ulp.digits longdouble.neg.ulp.digits       longdouble.exponent 
            -6.300000e+01             -6.400000e+01              1.500000e+01 
       longdouble.min.exp        longdouble.max.exp 
            -1.638200e+04              1.638400e+04 

Random number generation process:

[1] "Mersenne-Twister" "Inversion"        "Rejection"       

Information about the environment

Environmental and options variables affect how package checks and software in it might behave. Here is the environmental variables when running this report

_R_CHECK_SYSTEM_CLOCK_
                        FALSE
ACCEPT_EULA             Y
ACTIONS_RUNNER_ACTION_ARCHIVE_CACHE
                        /opt/actionarchivecache
AGENT_TOOLSDIRECTORY    /opt/hostedtoolcache
ANDROID_HOME            /usr/local/lib/android/sdk
ANDROID_NDK             /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_HOME        /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_LATEST_HOME
                        /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_ROOT        /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_SDK_ROOT        /usr/local/lib/android/sdk
ANT_HOME                /usr/share/ant
AZURE_EXTENSION_DIR     /opt/az/azcliextensions
BOOTSTRAP_HASKELL_NONINTERACTIVE
                        1
BUNDLE_EXT              linux-amd64.deb
CHROME_BIN              /usr/bin/google-chrome
CHROMEWEBDRIVER         /usr/local/share/chromedriver-linux64
CI                      true
CONDA                   /usr/share/miniconda
DEBIAN_FRONTEND         noninteractive
DENO_DOM_PLUGIN         /opt/quarto/bin/tools/x86_64/deno_dom/libplugin.so
DENO_NO_UPDATE_CHECK    1
DENO_TLS_CA_STORE       system,mozilla
DEPLOYMENT_BASEPATH     /opt/runner
DOTNET_MULTILEVEL_LOOKUP
                        0
DOTNET_NOLOGO           1
DOTNET_SKIP_FIRST_TIME_EXPERIENCE
                        1
EDGEWEBDRIVER           /usr/local/share/edge_driver
EDITOR                  vi
GECKOWEBDRIVER          /usr/local/share/gecko_driver
GHCUP_INSTALL_BASE_PREFIX
                        /usr/local
GITHUB_ACTION           __run
GITHUB_ACTION_REF       
GITHUB_ACTION_REPOSITORY
                        
GITHUB_ACTIONS          true
GITHUB_ACTOR            llrs-roche
GITHUB_ACTOR_ID         185338939
GITHUB_API_URL          https://api.github.com
GITHUB_BASE_REF         
GITHUB_ENV              /home/runner/work/_temp/_runner_file_commands/set_env_c412a26f-cd8a-499e-b689-b0767882aa5e
GITHUB_EVENT_NAME       schedule
GITHUB_EVENT_PATH       /home/runner/work/_temp/_github_workflow/event.json
GITHUB_GRAPHQL_URL      https://api.github.com/graphql
GITHUB_HEAD_REF         
GITHUB_JOB              main
GITHUB_OUTPUT           /home/runner/work/_temp/_runner_file_commands/set_output_c412a26f-cd8a-499e-b689-b0767882aa5e
GITHUB_PATH             /home/runner/work/_temp/_runner_file_commands/add_path_c412a26f-cd8a-499e-b689-b0767882aa5e
GITHUB_REF              refs/heads/main
GITHUB_REF_NAME         main
GITHUB_REF_PROTECTED    false
GITHUB_REF_TYPE         branch
GITHUB_REPOSITORY       pharmaR/pharmapkgs
GITHUB_REPOSITORY_ID    798326913
GITHUB_REPOSITORY_OWNER
                        pharmaR
GITHUB_REPOSITORY_OWNER_ID
                        42115094
GITHUB_RETENTION_DAYS   90
GITHUB_RUN_ATTEMPT      1
GITHUB_RUN_ID           13404668958
GITHUB_RUN_NUMBER       96
GITHUB_SERVER_URL       https://github.com
GITHUB_SHA              a8b95a62e6dc098bb3af41043304208245a9ed4a
GITHUB_STATE            /home/runner/work/_temp/_runner_file_commands/save_state_c412a26f-cd8a-499e-b689-b0767882aa5e
GITHUB_STEP_SUMMARY     /home/runner/work/_temp/_runner_file_commands/step_summary_c412a26f-cd8a-499e-b689-b0767882aa5e
GITHUB_TRIGGERING_ACTOR
                        llrs-roche
GITHUB_WORKFLOW         Update package repositories
GITHUB_WORKFLOW_REF     pharmaR/pharmapkgs/.github/workflows/update-repos.yml@refs/heads/main
GITHUB_WORKFLOW_SHA     a8b95a62e6dc098bb3af41043304208245a9ed4a
GITHUB_WORKSPACE        /home/runner/work/pharmapkgs/pharmapkgs
GOROOT_1_21_X64         /opt/hostedtoolcache/go/1.21.13/x64
GOROOT_1_22_X64         /opt/hostedtoolcache/go/1.22.12/x64
GOROOT_1_23_X64         /opt/hostedtoolcache/go/1.23.6/x64
GRADLE_HOME             /usr/share/gradle-8.12.1
HOME                    /home/runner
HOMEBREW_CLEANUP_PERIODIC_FULL_DAYS
                        3650
HOMEBREW_NO_AUTO_UPDATE
                        1
ImageOS                 ubuntu24
ImageVersion            20250209.1.0
INVOCATION_ID           8bd4b7db4d15432e8df0477a564753c1
JAVA_HOME               /usr/lib/jvm/temurin-17-jdk-amd64
JAVA_HOME_11_X64        /usr/lib/jvm/temurin-11-jdk-amd64
JAVA_HOME_17_X64        /usr/lib/jvm/temurin-17-jdk-amd64
JAVA_HOME_21_X64        /usr/lib/jvm/temurin-21-jdk-amd64
JAVA_HOME_8_X64         /usr/lib/jvm/temurin-8-jdk-amd64
JOURNAL_STREAM          8:7410
LANG                    C.UTF-8
LD_LIBRARY_PATH         /opt/R/4.4.2/lib/R/lib:/usr/local/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/temurin-17-jdk-amd64/lib/server:/opt/R/4.4.2/lib/R/lib:/usr/local/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/temurin-17-jdk-amd64/lib/server
LN_S                    ln -s
LOGGER_LOG_LEVEL        DEBUG
MAKE                    make
MEMORY_PRESSURE_WATCH   /sys/fs/cgroup/system.slice/runner-provisioner.service/memory.pressure
MEMORY_PRESSURE_WRITE   c29tZSAyMDAwMDAgMjAwMDAwMAA=
NOT_CRAN                true
NVM_DIR                 /home/runner/.nvm
PAGER                   /usr/bin/pager
PATH                    /snap/bin:/home/runner/.local/bin:/opt/pipx_bin:/home/runner/.cargo/bin:/home/runner/.config/composer/vendor/bin:/usr/local/.ghcup/bin:/home/runner/.dotnet/tools:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
PERFLOG_LOCATION_SETTING
                        RUNNER_PERFLOG
PHARMAPKGS_EXCLUDED_METRICS
                        assess_covr_coverage,assess_r_cmd_check
PHARMAPKGS_LIMIT        1000
PHARMAPKGS_PLATFORM     ubuntu-22.04
PHARMAPKGS_R_VERSION    4.4
PHARMAPKGS_REMOTE_REPO
                        https://cloud.r-project.org/
PIPX_BIN_DIR            /opt/pipx_bin
PIPX_HOME               /opt/pipx
PKGCACHE_HTTP_VERSION   2
PKGLOAD_PARENT_TEMPDIR
                        /tmp/RtmpZYt03y
POWERSHELL_DISTRIBUTION_CHANNEL
                        GitHub-Actions-ubuntu24
PROCESSX_PS1d455d24c1cd_1739942068
                        YES
PWD                     /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_BIN_PATH         /opt/quarto/bin
QUARTO_DENO             /opt/quarto/bin/tools/x86_64/deno
QUARTO_DOCUMENT_PATH    /home/runner/work/pharmapkgs/pharmapkgs/inst/report
QUARTO_PROFILE          
QUARTO_PROJECT_DIR      /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_PROJECT_ROOT     /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_ROOT             /
QUARTO_SHARE_PATH       /opt/quarto/share
R_ARCH                  
R_BROWSER               xdg-open
R_BZIPCMD               /usr/bin/bzip2
R_DOC_DIR               /opt/R/4.4.2/lib/R/doc
R_GZIPCMD               /usr/bin/gzip
R_HOME                  /opt/R/4.4.2/lib/R
R_INCLUDE_DIR           /opt/R/4.4.2/lib/R/include
R_LIB_FOR_PAK           /opt/R/4.4.2/lib/R/site-library
R_LIBS_SITE             /opt/R/4.4.2/lib/R/site-library
R_LIBS_USER             /home/runner/work/_temp/Library
R_PAPERSIZE             letter
R_PAPERSIZE_USER        letter
R_PDFVIEWER             /usr/bin/xdg-open
R_PLATFORM              x86_64-pc-linux-gnu
R_PRINTCMD              /usr/bin/lpr
R_RD4PDF                times,inconsolata,hyper
R_SESSION_TMPDIR        /tmp/RtmpKToc30
R_SHARE_DIR             /opt/R/4.4.2/lib/R/share
R_STRIP_SHARED_LIB      strip --strip-unneeded
R_STRIP_STATIC_LIB      strip --strip-debug
R_TEXI2DVICMD           /usr/bin/texi2dvi
R_UNZIPCMD              /usr/bin/unzip
R_ZIPCMD                /usr/bin/zip
RUNNER_ARCH             X64
RUNNER_ENVIRONMENT      github-hosted
RUNNER_NAME             GitHub Actions 2
RUNNER_OS               Linux
RUNNER_PERFLOG          /home/runner/perflog
RUNNER_TEMP             /home/runner/work/_temp
RUNNER_TOOL_CACHE       /opt/hostedtoolcache
RUNNER_TRACKING_ID      github_40220c0a-4f03-4847-8b7e-3a374b87939a
RUNNER_USER             runner
RUNNER_WORKSPACE        /home/runner/work/pharmapkgs
SED                     /usr/bin/sed
SELENIUM_JAR_PATH       /usr/share/java/selenium-server.jar
SGX_AESM_ADDR           1
SHLVL                   1
STATS_D                 true
STATS_D_D               true
STATS_D_TC              true
STATS_EXT               true
STATS_EXTP              https://provjobdprod.z13.web.core.windows.net/settings/provjobdsettings-latest/provjobd.data
STATS_PIP               false
STATS_RDCL              true
STATS_TRP               true
STATS_UE                true
STATS_V3PS              true
STATS_VMD               true
STATS_VMFE              true
SWIFT_PATH              /usr/share/swift/usr/bin
SYSTEMD_EXEC_PID        837
TAR                     /usr/bin/tar
TZ                      UTC
USER                    runner
VCPKG_INSTALLATION_ROOT
                        /usr/local/share/vcpkg
XDG_CONFIG_HOME         /home/runner/.config
XDG_RUNTIME_DIR         /run/user/1001

These are the options set to generate the report:

$add.smooth
[1] TRUE

$bitmapType
[1] "cairo"

$browser
[1] "xdg-open"

$browserNLdisabled
[1] FALSE

$callr.condition_handler_cli_message
function (msg) 
{
    custom_handler <- getOption("cli.default_handler")
    if (is.function(custom_handler)) {
        custom_handler(msg)
    }
    else {
        cli_server_default(msg)
    }
}
<bytecode: 0x5603148a5910>
<environment: namespace:cli>

$catch.script.errors
[1] FALSE

$CBoundsCheck
[1] FALSE

$check.bounds
[1] FALSE

$citation.bibtex.max
[1] 1

$continue
[1] "+ "

$contrasts
        unordered           ordered 
"contr.treatment"      "contr.poly" 

$covr.record_tests
[1] TRUE

$defaultPackages
[1] "datasets"  "utils"     "grDevices" "graphics"  "stats"     "methods"  

$demo.ask
[1] "default"

$deparse.cutoff
[1] 60

$device
function (width = 7, height = 7, ...) 
{
    grDevices::pdf(NULL, width, height, ...)
}
<bytecode: 0x560313c94c40>
<environment: namespace:knitr>

$device.ask.default
[1] FALSE

$digits
[1] 7

$dvipscmd
[1] "dvips"

$echo
[1] FALSE

$editor
[1] "vi"

$encoding
[1] "native.enc"

$example.ask
[1] "default"

$expressions
[1] 5000

$help.search.types
[1] "vignette" "demo"     "help"    

$help.try.all.packages
[1] FALSE

$htmltools.preserve.raw
[1] TRUE

$HTTPUserAgent
[1] "R/4.4.2 R (4.4.2 x86_64-pc-linux-gnu x86_64 linux-gnu) on GitHub Actions"

$internet.info
[1] 2

$keep.parse.data
[1] TRUE

$keep.parse.data.pkgs
[1] FALSE

$keep.source
[1] FALSE

$keep.source.pkgs
[1] FALSE

$knitr.in.progress
[1] TRUE

$locatorBell
[1] TRUE

$mailer
[1] "mailto"

$matprod
[1] "default"

$max.contour.segments
[1] 25000

$max.print
[1] 99999

$menu.graphics
[1] TRUE

$na.action
[1] "na.omit"

$Ncpus
[1] 1

$nwarnings
[1] 50

$OutDec
[1] "."

$pager
[1] "/opt/R/4.4.2/lib/R/bin/pager"

$papersize
[1] "letter"

$PCRE_limit_recursion
[1] NA

$PCRE_study
[1] FALSE

$PCRE_use_JIT
[1] TRUE

$pdfviewer
[1] "/usr/bin/xdg-open"

$pkgType
[1] "source"

$printcmd
[1] "/usr/bin/lpr"

$prompt
[1] "> "

$repos
                      CRAN 
"https://cran.rstudio.com" 

$rl_word_breaks
[1] " \t\n\"\\'`><=%;,|&{()}"

$rlang_trace_top_env
<environment: R_GlobalEnv>

$scipen
[1] 0

$show.coef.Pvalues
[1] TRUE

$show.error.messages
[1] TRUE

$show.signif.stars
[1] TRUE

$showErrorCalls
[1] TRUE

$showNCalls
[1] 50

$showWarnCalls
[1] FALSE

$str
$str$strict.width
[1] "no"

$str$digits.d
[1] 3

$str$vec.len
[1] 4

$str$list.len
[1] 99

$str$deparse.lines
NULL

$str$drop.deparse.attr
[1] TRUE

$str$formatNum
function (x, ...) 
format(x, trim = TRUE, drop0trailing = TRUE, ...)
<environment: 0x560313d7d520>


$str.dendrogram.last
[1] "`"

$texi2dvi
[1] "/usr/bin/texi2dvi"

$tikzMetricsDictionary
[1] "validation_report_fastai_v2.2.2-tikzDictionary"

$timeout
[1] 60

$try.outFile
A connection with                    
description ""      
class       "file"  
mode        "w+b"   
text        "binary"
opened      "opened"
can read    "yes"   
can write   "yes"   

$ts.eps
[1] 1e-05

$ts.S.compat
[1] FALSE

$unzip
[1] "/usr/bin/unzip"

$useFancyQuotes
[1] FALSE

$verbose
[1] FALSE

$warn
[1] 0

$warning.length
[1] 1000

$warnPartialMatchArgs
[1] FALSE

$warnPartialMatchAttr
[1] FALSE

$warnPartialMatchDollar
[1] FALSE

$width
[1] 80