Validation Report - ds4psy@1.0.0
Context
This report is fully automated and builds on rhub/ref-image image. Documents the installation of this package on an open source R environment, focusing on:
- Installation environment description
- Testing coverage
It is limited to assess whether unit tests and documentation are present and can execute without error. An assessment would be required that the tests and documentation are meaningful.
Package ds4psy
Metric based risk assessment
The following metrics are derived from the riskmetric
R package.
has_news | 1 |
news_current | TRUE |
exported_namespace | 66 |
has_vignettes | 2 |
export_help | 66 |
has_website | TRUE |
has_maintainer | Hansjoerg Neth h.neth@uni.kn |
bugs_status | subscript out of bounds |
has_source_control | https://github.com/hneth/ds4psy/ |
has_bug_reports_url | 1 |
downloads_1yr | 5176 |
reverse_dependencies | 0 |
has_examples | 1 |
dependencies | 2 |
license | CC BY-SA 4.0 |
Package general assessment: Coverage, check results, size, download the last year, reverse dependencies and number of dependencies.
Dependencies
Overall the package has these dependencies:
package | type | |
---|---|---|
1 | ggplot2 | Imports |
2 | unikn | Imports |
Package dependencies
Reverse dependencies
Overall the package has 0 reverse dependencies:
Namespace
Overall the package has 66 exported objects. 66 are documented:
base_digits base2dec capitalize caseflip
TRUE TRUE TRUE TRUE
cclass change_time change_tz chars_to_text
TRUE TRUE TRUE TRUE
coin collapse_chars count_chars count_chars_words
TRUE TRUE TRUE TRUE
count_words cur_date cur_time days_in_month
TRUE TRUE TRUE TRUE
dec2base dice dice_2 diff_dates
TRUE TRUE TRUE TRUE
diff_times diff_tz ds4psy.guide get_set
TRUE TRUE TRUE TRUE
invert_rules is_equal is_leap_year is_vect
TRUE TRUE TRUE TRUE
is_wholenumber l33t_rul35 make_grid map_text_coord
TRUE TRUE TRUE TRUE
map_text_regex metachar num_as_char num_as_ordinal
TRUE TRUE TRUE TRUE
num_equal pal_ds4psy pal_n_sq plot_charmap
TRUE TRUE TRUE TRUE
plot_chars plot_fn plot_fun plot_n
TRUE TRUE TRUE TRUE
plot_text plot_tiles read_ascii sample_char
TRUE TRUE TRUE TRUE
sample_date sample_time text_to_chars text_to_sentences
TRUE TRUE TRUE TRUE
text_to_words theme_clean theme_ds4psy theme_empty
TRUE TRUE TRUE TRUE
transl33t Umlaut what_date what_month
TRUE TRUE TRUE TRUE
what_time what_wday what_week what_year
TRUE TRUE TRUE TRUE
words_to_text zodiac
TRUE TRUE
Examples
There are 102 help pages with examples, from 102 (100.00 %).
NEWS
The package has NEWS file and it is current.
License
The package uses .
Installation environment
System Info
Field | Value |
---|---|
Image | rhub/ref-image |
OS | Ubuntu 24.04.1 LTS |
Platform | x86_64-pc-linux-gnu |
System | x86_64, linux-gnu |
Execution Time | 2025-02-18 04:49:28 UTC |
System information. Table about the system used to check the package.
R Session Info
Information about the R environment and capabilities:
R version 4.4.2 (2024-10-31)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 24.04.1 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.26.so; LAPACK version 3.12.0
locale:
[1] LC_CTYPE=C.UTF-8 LC_NUMERIC=C LC_TIME=C.UTF-8
[4] LC_COLLATE=C.UTF-8 LC_MONETARY=C.UTF-8 LC_MESSAGES=C.UTF-8
[7] LC_PAPER=C.UTF-8 LC_NAME=C LC_ADDRESS=C
[10] LC_TELEPHONE=C LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C
time zone: UTC
tzcode source: system (glibc)
attached base packages:
[1] tools stats graphics grDevices utils datasets methods
[8] base
loaded via a namespace (and not attached):
[1] riskreports_0.0.0.9003 compiler_4.4.2 fastmap_1.2.0
[4] cli_3.6.4 htmltools_0.5.8.1 yaml_2.3.10
[7] rmarkdown_2.29 knitr_1.49 jsonlite_1.8.9
[10] xfun_0.50 digest_0.6.37 rlang_1.1.5
[13] evaluate_1.0.3
Platform used:
OS.type file.sep dynlib.ext GUI endian pkgType path.sep
"unix" "/" ".so" "X11" "little" "source" ":"
r_arch
""
R’s capabilities:
jpeg png tiff tcltk X11 aqua
TRUE TRUE TRUE TRUE FALSE FALSE
http/ftp sockets libxml fifo cledit iconv
TRUE TRUE FALSE TRUE FALSE TRUE
NLS Rprof profmem cairo ICU long.double
TRUE TRUE TRUE TRUE TRUE TRUE
libcurl
TRUE
External software:
zlib
"1.3"
bzlib
"1.0.8, 13-Jul-2019"
xz
"5.4.5"
libdeflate
"1.19"
PCRE
"10.42 2022-12-11"
ICU
"74.2"
TRE
"TRE 0.8.0 R_fixes (BSD)"
iconv
"glibc 2.39"
readline
"8.2"
BLAS
"/usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3"
Graphics external software:
cairo cairoFT pango
"1.18.0" "" "1.52.1"
libpng jpeg libtiff
"1.6.43" "8.0" "LIBTIFF, Version 4.5.1"
Numerical characteristics of the machine:
double.eps double.neg.eps double.xmin
2.220446e-16 1.110223e-16 2.225074e-308
double.xmax double.base double.digits
1.797693e+308 2.000000e+00 5.300000e+01
double.rounding double.guard double.ulp.digits
5.000000e+00 0.000000e+00 -5.200000e+01
double.neg.ulp.digits double.exponent double.min.exp
-5.300000e+01 1.100000e+01 -1.022000e+03
double.max.exp integer.max sizeof.long
1.024000e+03 2.147484e+09 8.000000e+00
sizeof.longlong sizeof.longdouble sizeof.pointer
8.000000e+00 1.600000e+01 8.000000e+00
sizeof.time_t longdouble.eps longdouble.neg.eps
8.000000e+00 1.084202e-19 5.421011e-20
longdouble.digits longdouble.rounding longdouble.guard
6.400000e+01 5.000000e+00 0.000000e+00
longdouble.ulp.digits longdouble.neg.ulp.digits longdouble.exponent
-6.300000e+01 -6.400000e+01 1.500000e+01
longdouble.min.exp longdouble.max.exp
-1.638200e+04 1.638400e+04
Random number generation process:
[1] "Mersenne-Twister" "Inversion" "Rejection"
Information about the environment
Environmental and options variables affect how package checks and software in it might behave. Here is the environmental variables when running this report
_R_CHECK_SYSTEM_CLOCK_
FALSE
ACCEPT_EULA Y
ACTIONS_RUNNER_ACTION_ARCHIVE_CACHE
/opt/actionarchivecache
AGENT_TOOLSDIRECTORY /opt/hostedtoolcache
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ANDROID_NDK_HOME /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_LATEST_HOME
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ANDROID_NDK_ROOT /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_SDK_ROOT /usr/local/lib/android/sdk
ANT_HOME /usr/share/ant
AZURE_EXTENSION_DIR /opt/az/azcliextensions
BOOTSTRAP_HASKELL_NONINTERACTIVE
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BUNDLE_EXT linux-amd64.deb
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DENO_TLS_CA_STORE system,mozilla
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DOTNET_MULTILEVEL_LOOKUP
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GITHUB_TRIGGERING_ACTOR
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GITHUB_WORKFLOW_SHA 157fff498035c254c88cbf9e2cfd3aeb384ab8f5
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HOME /home/runner
HOMEBREW_CLEANUP_PERIODIC_FULL_DAYS
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HOMEBREW_NO_AUTO_UPDATE
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INVOCATION_ID bc1187a89ae54556a37eda746d0322c1
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LN_S ln -s
LOGGER_LOG_LEVEL DEBUG
MAKE make
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MEMORY_PRESSURE_WRITE c29tZSAyMDAwMDAgMjAwMDAwMAA=
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PAGER /usr/bin/pager
PATH /snap/bin:/home/runner/.local/bin:/opt/pipx_bin:/home/runner/.cargo/bin:/home/runner/.config/composer/vendor/bin:/usr/local/.ghcup/bin:/home/runner/.dotnet/tools:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
PERFLOG_LOCATION_SETTING
RUNNER_PERFLOG
PHARMAPKGS_EXCLUDED_METRICS
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PHARMAPKGS_LIMIT 1000
PHARMAPKGS_PLATFORM ubuntu-22.04
PHARMAPKGS_R_VERSION 4.4
PHARMAPKGS_REMOTE_REPO
https://cloud.r-project.org/
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PIPX_HOME /opt/pipx
PKGCACHE_HTTP_VERSION 2
PKGLOAD_PARENT_TEMPDIR
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POWERSHELL_DISTRIBUTION_CHANNEL
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YES
PWD /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_BIN_PATH /opt/quarto/bin
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QUARTO_DOCUMENT_PATH /home/runner/work/pharmapkgs/pharmapkgs/inst/report
QUARTO_PROFILE
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QUARTO_PROJECT_ROOT /home/runner/work/pharmapkgs/pharmapkgs
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R_ARCH
R_BROWSER xdg-open
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R_PAPERSIZE letter
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R_PDFVIEWER /usr/bin/xdg-open
R_PLATFORM x86_64-pc-linux-gnu
R_PRINTCMD /usr/bin/lpr
R_RD4PDF times,inconsolata,hyper
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R_STRIP_SHARED_LIB strip --strip-unneeded
R_STRIP_STATIC_LIB strip --strip-debug
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R_UNZIPCMD /usr/bin/unzip
R_ZIPCMD /usr/bin/zip
RUNNER_ARCH X64
RUNNER_ENVIRONMENT github-hosted
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RUNNER_TRACKING_ID github_c8a03d70-50b4-4e41-a95e-f8c1a5765170
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SED /usr/bin/sed
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SGX_AESM_ADDR 1
SHLVL 1
STATS_D true
STATS_D_D true
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TZ UTC
USER runner
VCPKG_INSTALLATION_ROOT
/usr/local/share/vcpkg
XDG_CONFIG_HOME /home/runner/.config
XDG_RUNTIME_DIR /run/user/1001
These are the options set to generate the report:
$add.smooth
[1] TRUE
$bitmapType
[1] "cairo"
$browser
[1] "xdg-open"
$browserNLdisabled
[1] FALSE
$callr.condition_handler_cli_message
function (msg)
{
custom_handler <- getOption("cli.default_handler")
if (is.function(custom_handler)) {
custom_handler(msg)
}
else {
cli_server_default(msg)
}
}
<bytecode: 0x56271c7a9910>
<environment: namespace:cli>
$catch.script.errors
[1] FALSE
$CBoundsCheck
[1] FALSE
$check.bounds
[1] FALSE
$citation.bibtex.max
[1] 1
$continue
[1] "+ "
$contrasts
unordered ordered
"contr.treatment" "contr.poly"
$covr.record_tests
[1] TRUE
$defaultPackages
[1] "datasets" "utils" "grDevices" "graphics" "stats" "methods"
$demo.ask
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$deparse.cutoff
[1] 60
$device
function (width = 7, height = 7, ...)
{
grDevices::pdf(NULL, width, height, ...)
}
<bytecode: 0x56271be44fe0>
<environment: namespace:knitr>
$device.ask.default
[1] FALSE
$digits
[1] 7
$dvipscmd
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$echo
[1] FALSE
$editor
[1] "vi"
$encoding
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$example.ask
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$expressions
[1] 5000
$help.search.types
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$help.try.all.packages
[1] FALSE
$htmltools.preserve.raw
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$HTTPUserAgent
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$internet.info
[1] 2
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[1] TRUE
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[1] FALSE
$keep.source
[1] FALSE
$keep.source.pkgs
[1] FALSE
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[1] TRUE
$locatorBell
[1] TRUE
$mailer
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$matprod
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$max.contour.segments
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$max.print
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$menu.graphics
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$na.action
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$Ncpus
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$OutDec
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$papersize
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$PCRE_limit_recursion
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$PCRE_use_JIT
[1] TRUE
$pdfviewer
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$pkgType
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$printcmd
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$prompt
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$repos
CRAN
"https://cran.rstudio.com"
$rl_word_breaks
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$rlang_trace_top_env
<environment: R_GlobalEnv>
$scipen
[1] 0
$show.coef.Pvalues
[1] TRUE
$show.error.messages
[1] TRUE
$show.signif.stars
[1] TRUE
$showErrorCalls
[1] TRUE
$showNCalls
[1] 50
$showWarnCalls
[1] FALSE
$str
$str$strict.width
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$str$digits.d
[1] 3
$str$vec.len
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$str$list.len
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$str$deparse.lines
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$str$drop.deparse.attr
[1] TRUE
$str$formatNum
function (x, ...)
format(x, trim = TRUE, drop0trailing = TRUE, ...)
<environment: 0x56271bc81520>
$str.dendrogram.last
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$texi2dvi
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$tikzMetricsDictionary
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$timeout
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$try.outFile
A connection with
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class "file"
mode "w+b"
text "binary"
opened "opened"
can read "yes"
can write "yes"
$ts.eps
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$ts.S.compat
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$unzip
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$useFancyQuotes
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$verbose
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$warn
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$warning.length
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$warnPartialMatchArgs
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$warnPartialMatchAttr
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$warnPartialMatchDollar
[1] FALSE
$width
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