Validation Report - dbplyr@2.5.0

Context

This report is fully automated and builds on rhub/ref-image image. Documents the installation of this package on an open source R environment, focusing on:

  • Installation environment description
  • Testing coverage

It is limited to assess whether unit tests and documentation are present and can execute without error. An assessment would be required that the tests and documentation are meaningful.

Package dbplyr

Metric based risk assessment

The following metrics are derived from the riskmetric R package.

has_news 1
news_current TRUE
exported_namespace 171
has_vignettes 16
export_help 171
has_website TRUE
has_maintainer Hadley Wickham
bugs_status subscript out of bounds
has_source_control https://github.com/tidyverse/dbplyr
has_bug_reports_url 1
downloads_1yr 6682959
reverse_dependencies 120
has_examples 0.9866667
dependencies 18
license MIT + file LICENSE

Package general assessment: Coverage, check results, size, download the last year, reverse dependencies and number of dependencies.

Dependencies

Overall the package has these dependencies:

package type
1 blob (>= 1.2.0) Imports
2 cli (>= 3.6.1) Imports
3 DBI (>= 1.1.3) Imports
4 dplyr (>= 1.1.2) Imports
5 glue (>= 1.6.2) Imports
6 lifecycle (>= 1.0.3) Imports
7 magrittr Imports
8 methods Imports
9 pillar (>= 1.9.0) Imports
10 purrr (>= 1.0.1) Imports
11 R6 (>= 2.2.2) Imports
12 rlang (>= 1.1.1) Imports
13 tibble (>= 3.2.1) Imports
14 tidyr (>= 1.3.0) Imports
15 tidyselect (>= 1.2.1) Imports
16 utils Imports
17 vctrs (>= 0.6.3) Imports
18 withr (>= 2.5.0) Imports

Package dependencies

Reverse dependencies

Overall the package has 120 reverse dependencies:

activAnalyzer, allofus, Andromeda, apache.sedona, arcgislayers, arcgisutils, arkdb, arrow, basedosdados, bcdata, bigrquery, bigsnpr, BiocFileCache, BiocOncoTK, cansim, CDMConnector, censo2017, censobr, childesr, chunked, ckanr, CohortCharacteristics, CohortConstructor, CohortSurvival, CohortSymmetry, CompoundDb, connectapi, connections, corrr, covidmx, CuratedAtlasQueryR, cytominer, DatabaseConnector, dataverifyr, dbglm, DBI, dbi.table, dbplot, diseasystore, dittodb, dlookr, dm, dplyr, duckdb, duckdbfs, duckplyr, ECOTOXr, editbl, epoxy, etl, farr, gbifdb, geocodebr, geogenr, GEOmetadb, geospark, globaltrends, gpkg, healthdb, implyr, IncidencePrevalence, iNZightPlots, iNZightTools, ipumsr, janitor, kidsides, lazysf, macleish, mall, mdsr, mfdb, mlr3db, modeldb, mpathsenser, msPurity, noctua, NoRCE, omopgenerics, orbital, Organism.dplyr, overtureR, PatientProfiles, pointblank, pool, pysparklyr, qst, r4ds.tutorials, radiant.data, RAthena, rdataretriever, resourcer, ResultModelManager, ReviewR, rolap, RPresto, SCDB, sergeant, shinyNotes, simaerep, soundClass, sparklyr, sparklyr.flint, sqliteutils, sqlscore, srvyr, starwarsdb, stevemisc, taxadb, tidier, tidyfinance, tidyhydat, tidypredict, tidyquery, tidyverse, TreatmentPatterns, valr, vegdata, VicmapR, when, writer

Namespace

Overall the package has 171 exported objects. 170 are documented:

                            %>%                   as_table_path 
                          FALSE                            TRUE 
                         as.sql                        base_agg 
                           TRUE                            TRUE 
                    base_no_win                   base_odbc_agg 
                           TRUE                            TRUE 
               base_odbc_scalar                   base_odbc_win 
                           TRUE                            TRUE 
                    base_scalar                        base_win 
                           TRUE                            TRUE 
                      build_sql                check_table_path 
                           TRUE                            TRUE 
                    copy_inline                     copy_lahman 
                           TRUE                            TRUE 
              copy_nycflights13                    db_col_types 
                           TRUE                            TRUE 
                     db_collect                      db_compute 
                           TRUE                            TRUE 
         db_connection_describe                      db_copy_to 
                           TRUE                            TRUE 
                  db_sql_render db_supports_table_alias_with_as 
                           TRUE                            TRUE 
             db_table_temporary                  dbplyr_edition 
                           TRUE                            TRUE 
        dbplyr_pivot_wider_spec                  dbplyr_uncount 
                           TRUE                            TRUE 
                         escape                     escape_ansi 
                           TRUE                            TRUE 
              get_returned_rows                      has_lahman 
                           TRUE                            TRUE 
               has_nycflights13               has_returned_rows 
                           TRUE                            TRUE 
                          ident                         ident_q 
                           TRUE                            TRUE 
                     in_catalog                       in_schema 
                           TRUE                            TRUE 
                  is_table_path                        is.ident 
                           TRUE                            TRUE 
                         is.sql                      join_query 
                           TRUE                            TRUE 
                   lahman_mysql                 lahman_postgres 
                           TRUE                            TRUE 
                  lahman_sqlite                     lahman_srcs 
                           TRUE                            TRUE 
                lazy_base_query                      lazy_frame 
                           TRUE                            TRUE 
          lazy_multi_join_query                      lazy_query 
                           TRUE                            TRUE 
             lazy_rf_join_query               lazy_select_query 
                           TRUE                            TRUE 
           lazy_semi_join_query               lazy_set_op_query 
                           TRUE                            TRUE 
               lazy_union_query                     memdb_frame 
                           TRUE                            TRUE 
                   named_commas           nycflights13_postgres 
                           TRUE                            TRUE 
            nycflights13_sqlite                        op_frame 
                           TRUE                            TRUE 
                        op_grps                         op_sort 
                           TRUE                            TRUE 
                        op_vars                    partial_eval 
                           TRUE                            TRUE 
                     remote_con                     remote_name 
                           TRUE                            TRUE 
                   remote_query               remote_query_plan 
                           TRUE                            TRUE 
                     remote_src                    remote_table 
                           TRUE                            TRUE 
                   select_query                 semi_join_query 
                           TRUE                            TRUE 
                   set_op_query                 simulate_access 
                           TRUE                            TRUE 
                   simulate_dbi                   simulate_hana 
                           TRUE                            TRUE 
                  simulate_hive                 simulate_impala 
                           TRUE                            TRUE 
               simulate_mariadb                  simulate_mssql 
                           TRUE                            TRUE 
                 simulate_mysql                   simulate_odbc 
                           TRUE                            TRUE 
                simulate_oracle               simulate_postgres 
                           TRUE                            TRUE 
              simulate_redshift              simulate_snowflake 
                           TRUE                            TRUE 
             simulate_spark_sql                 simulate_sqlite 
                           TRUE                            TRUE 
              simulate_teradata                             sql 
                           TRUE                            TRUE 
                  sql_aggregate                 sql_aggregate_2 
                           TRUE                            TRUE 
                sql_aggregate_n                       sql_build 
                           TRUE                            TRUE 
                      sql_call2                        sql_cast 
                           TRUE                            TRUE 
                        sql_cot                 sql_escape_date 
                           TRUE                            TRUE 
            sql_escape_datetime              sql_escape_logical 
                           TRUE                            TRUE 
                 sql_escape_raw                        sql_expr 
                           TRUE                            TRUE 
               sql_expr_matches             sql_indent_subquery 
                           TRUE                            TRUE 
                      sql_infix                 sql_join_suffix 
                           TRUE                            TRUE 
                        sql_log               sql_not_supported 
                           TRUE                            TRUE 
                   sql_optimise                     sql_options 
                           TRUE                            TRUE 
                      sql_paste                 sql_paste_infix 
                           TRUE                            TRUE 
                     sql_prefix                sql_query_append 
                           TRUE                            TRUE 
               sql_query_delete               sql_query_explain 
                           TRUE                            TRUE 
               sql_query_fields                sql_query_insert 
                           TRUE                            TRUE 
                 sql_query_join            sql_query_multi_join 
                           TRUE                            TRUE 
                 sql_query_rows                  sql_query_save 
                           TRUE                            TRUE 
               sql_query_select             sql_query_semi_join 
                           TRUE                            TRUE 
               sql_query_set_op                 sql_query_union 
                           TRUE                            TRUE 
          sql_query_update_from                sql_query_upsert 
                           TRUE                            TRUE 
                 sql_query_wrap                       sql_quote 
                           TRUE                            TRUE 
                     sql_random                      sql_render 
                           TRUE                            TRUE 
             sql_returning_cols                       sql_runif 
                           TRUE                            TRUE 
                    sql_str_sub                      sql_substr 
                           TRUE                            TRUE 
              sql_table_analyze                 sql_table_index 
                           TRUE                            TRUE 
                sql_translation                  sql_translator 
                           TRUE                            TRUE 
                   sql_try_cast                     sql_variant 
                           TRUE                            TRUE 
                     sql_vector                         src_dbi 
                           TRUE                            TRUE 
                      src_memdb                         src_sql 
                           TRUE                            TRUE 
                       src_test          supports_window_clause 
                           TRUE                            TRUE 
          table_path_components                 table_path_name 
                           TRUE                            TRUE 
                       tbl_lazy                       tbl_memdb 
                           TRUE                            TRUE 
                        tbl_sql                      test_frame 
                           TRUE                            TRUE 
                      test_load               test_register_con 
                           TRUE                            TRUE 
              test_register_src                   translate_sql 
                           TRUE                            TRUE 
                 translate_sql_                     union_query 
                           TRUE                            TRUE 
                     win_absent                   win_aggregate 
                           TRUE                            TRUE 
                win_aggregate_2                  win_cumulative 
                           TRUE                            TRUE 
              win_current_frame               win_current_group 
                           TRUE                            TRUE 
              win_current_order                        win_over 
                           TRUE                            TRUE 
                       win_rank                  win_rank_tdata 
                           TRUE                            TRUE 
                   win_recycled                    window_frame 
                           TRUE                            TRUE 
                   window_order 
                           TRUE 

Examples

There are 74 help pages with examples, from 75 (98.67 %).

NEWS

The package has NEWS file and it is current.

License

The package uses .

Installation environment

System Info

Field Value
Image rhub/ref-image
OS Ubuntu 24.04.1 LTS
Platform x86_64-pc-linux-gnu
System x86_64, linux-gnu
Execution Time 2025-02-17 05:08:00 UTC

System information. Table about the system used to check the package.

R Session Info

Information about the R environment and capabilities:

R version 4.4.2 (2024-10-31)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 24.04.1 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.26.so;  LAPACK version 3.12.0

locale:
 [1] LC_CTYPE=C.UTF-8       LC_NUMERIC=C           LC_TIME=C.UTF-8       
 [4] LC_COLLATE=C.UTF-8     LC_MONETARY=C.UTF-8    LC_MESSAGES=C.UTF-8   
 [7] LC_PAPER=C.UTF-8       LC_NAME=C              LC_ADDRESS=C          
[10] LC_TELEPHONE=C         LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C   

time zone: UTC
tzcode source: system (glibc)

attached base packages:
[1] tools     stats     graphics  grDevices utils     datasets  methods  
[8] base     

loaded via a namespace (and not attached):
 [1] riskreports_0.0.0.9003 compiler_4.4.2         fastmap_1.2.0         
 [4] cli_3.6.4              htmltools_0.5.8.1      yaml_2.3.10           
 [7] rmarkdown_2.29         knitr_1.49             jsonlite_1.8.9        
[10] xfun_0.50              digest_0.6.37          rlang_1.1.5           
[13] evaluate_1.0.3        

Platform used:

   OS.type   file.sep dynlib.ext        GUI     endian    pkgType   path.sep 
    "unix"        "/"      ".so"      "X11"   "little"   "source"        ":" 
    r_arch 
        "" 

R’s capabilities:

       jpeg         png        tiff       tcltk         X11        aqua 
       TRUE        TRUE        TRUE        TRUE       FALSE       FALSE 
   http/ftp     sockets      libxml        fifo      cledit       iconv 
       TRUE        TRUE       FALSE        TRUE       FALSE        TRUE 
        NLS       Rprof     profmem       cairo         ICU long.double 
       TRUE        TRUE        TRUE        TRUE        TRUE        TRUE 
    libcurl 
       TRUE 

External software:

                                                     zlib 
                                                    "1.3" 
                                                    bzlib 
                                     "1.0.8, 13-Jul-2019" 
                                                       xz 
                                                  "5.4.5" 
                                               libdeflate 
                                                   "1.19" 
                                                     PCRE 
                                       "10.42 2022-12-11" 
                                                      ICU 
                                                   "74.2" 
                                                      TRE 
                                "TRE 0.8.0 R_fixes (BSD)" 
                                                    iconv 
                                             "glibc 2.39" 
                                                 readline 
                                                    "8.2" 
                                                     BLAS 
"/usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3" 

Graphics external software:

                   cairo                  cairoFT                    pango 
                "1.18.0"                       ""                 "1.52.1" 
                  libpng                     jpeg                  libtiff 
                "1.6.43"                    "8.0" "LIBTIFF, Version 4.5.1" 

Numerical characteristics of the machine:

               double.eps            double.neg.eps               double.xmin 
             2.220446e-16              1.110223e-16             2.225074e-308 
              double.xmax               double.base             double.digits 
            1.797693e+308              2.000000e+00              5.300000e+01 
          double.rounding              double.guard         double.ulp.digits 
             5.000000e+00              0.000000e+00             -5.200000e+01 
    double.neg.ulp.digits           double.exponent            double.min.exp 
            -5.300000e+01              1.100000e+01             -1.022000e+03 
           double.max.exp               integer.max               sizeof.long 
             1.024000e+03              2.147484e+09              8.000000e+00 
          sizeof.longlong         sizeof.longdouble            sizeof.pointer 
             8.000000e+00              1.600000e+01              8.000000e+00 
            sizeof.time_t            longdouble.eps        longdouble.neg.eps 
             8.000000e+00              1.084202e-19              5.421011e-20 
        longdouble.digits       longdouble.rounding          longdouble.guard 
             6.400000e+01              5.000000e+00              0.000000e+00 
    longdouble.ulp.digits longdouble.neg.ulp.digits       longdouble.exponent 
            -6.300000e+01             -6.400000e+01              1.500000e+01 
       longdouble.min.exp        longdouble.max.exp 
            -1.638200e+04              1.638400e+04 

Random number generation process:

[1] "Mersenne-Twister" "Inversion"        "Rejection"       

Information about the environment

Environmental and options variables affect how package checks and software in it might behave. Here is the environmental variables when running this report

_R_CHECK_SYSTEM_CLOCK_
                        FALSE
ACCEPT_EULA             Y
ACTIONS_RUNNER_ACTION_ARCHIVE_CACHE
                        /opt/actionarchivecache
AGENT_TOOLSDIRECTORY    /opt/hostedtoolcache
ANDROID_HOME            /usr/local/lib/android/sdk
ANDROID_NDK             /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_HOME        /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_LATEST_HOME
                        /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_ROOT        /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_SDK_ROOT        /usr/local/lib/android/sdk
ANT_HOME                /usr/share/ant
AZURE_EXTENSION_DIR     /opt/az/azcliextensions
BOOTSTRAP_HASKELL_NONINTERACTIVE
                        1
BUNDLE_EXT              linux-amd64.deb
CHROME_BIN              /usr/bin/google-chrome
CHROMEWEBDRIVER         /usr/local/share/chromedriver-linux64
CI                      true
CONDA                   /usr/share/miniconda
DEBIAN_FRONTEND         noninteractive
DENO_DOM_PLUGIN         /opt/quarto/bin/tools/x86_64/deno_dom/libplugin.so
DENO_NO_UPDATE_CHECK    1
DENO_TLS_CA_STORE       system,mozilla
DEPLOYMENT_BASEPATH     /opt/runner
DOTNET_MULTILEVEL_LOOKUP
                        0
DOTNET_NOLOGO           1
DOTNET_SKIP_FIRST_TIME_EXPERIENCE
                        1
EDGEWEBDRIVER           /usr/local/share/edge_driver
EDITOR                  vi
GECKOWEBDRIVER          /usr/local/share/gecko_driver
GHCUP_INSTALL_BASE_PREFIX
                        /usr/local
GITHUB_ACTION           __run
GITHUB_ACTION_REF       
GITHUB_ACTION_REPOSITORY
                        
GITHUB_ACTIONS          true
GITHUB_ACTOR            llrs-roche
GITHUB_ACTOR_ID         185338939
GITHUB_API_URL          https://api.github.com
GITHUB_BASE_REF         
GITHUB_ENV              /home/runner/work/_temp/_runner_file_commands/set_env_24251222-dc77-41e6-994a-03413e3e9f5f
GITHUB_EVENT_NAME       schedule
GITHUB_EVENT_PATH       /home/runner/work/_temp/_github_workflow/event.json
GITHUB_GRAPHQL_URL      https://api.github.com/graphql
GITHUB_HEAD_REF         
GITHUB_JOB              main
GITHUB_OUTPUT           /home/runner/work/_temp/_runner_file_commands/set_output_24251222-dc77-41e6-994a-03413e3e9f5f
GITHUB_PATH             /home/runner/work/_temp/_runner_file_commands/add_path_24251222-dc77-41e6-994a-03413e3e9f5f
GITHUB_REF              refs/heads/main
GITHUB_REF_NAME         main
GITHUB_REF_PROTECTED    false
GITHUB_REF_TYPE         branch
GITHUB_REPOSITORY       pharmaR/pharmapkgs
GITHUB_REPOSITORY_ID    798326913
GITHUB_REPOSITORY_OWNER
                        pharmaR
GITHUB_REPOSITORY_OWNER_ID
                        42115094
GITHUB_RETENTION_DAYS   90
GITHUB_RUN_ATTEMPT      1
GITHUB_RUN_ID           13362121460
GITHUB_RUN_NUMBER       94
GITHUB_SERVER_URL       https://github.com
GITHUB_SHA              b25eba80408a4e3db53f5896d441ff2685638e62
GITHUB_STATE            /home/runner/work/_temp/_runner_file_commands/save_state_24251222-dc77-41e6-994a-03413e3e9f5f
GITHUB_STEP_SUMMARY     /home/runner/work/_temp/_runner_file_commands/step_summary_24251222-dc77-41e6-994a-03413e3e9f5f
GITHUB_TRIGGERING_ACTOR
                        llrs-roche
GITHUB_WORKFLOW         Update package repositories
GITHUB_WORKFLOW_REF     pharmaR/pharmapkgs/.github/workflows/update-repos.yml@refs/heads/main
GITHUB_WORKFLOW_SHA     b25eba80408a4e3db53f5896d441ff2685638e62
GITHUB_WORKSPACE        /home/runner/work/pharmapkgs/pharmapkgs
GOROOT_1_21_X64         /opt/hostedtoolcache/go/1.21.13/x64
GOROOT_1_22_X64         /opt/hostedtoolcache/go/1.22.12/x64
GOROOT_1_23_X64         /opt/hostedtoolcache/go/1.23.6/x64
GRADLE_HOME             /usr/share/gradle-8.12.1
HOME                    /home/runner
HOMEBREW_CLEANUP_PERIODIC_FULL_DAYS
                        3650
HOMEBREW_NO_AUTO_UPDATE
                        1
ImageOS                 ubuntu24
ImageVersion            20250209.1.0
INVOCATION_ID           d5e471a50fd941d195319ae0e3c382bb
JAVA_HOME               /usr/lib/jvm/temurin-17-jdk-amd64
JAVA_HOME_11_X64        /usr/lib/jvm/temurin-11-jdk-amd64
JAVA_HOME_17_X64        /usr/lib/jvm/temurin-17-jdk-amd64
JAVA_HOME_21_X64        /usr/lib/jvm/temurin-21-jdk-amd64
JAVA_HOME_8_X64         /usr/lib/jvm/temurin-8-jdk-amd64
JOURNAL_STREAM          8:6772
LANG                    C.UTF-8
LD_LIBRARY_PATH         /opt/R/4.4.2/lib/R/lib:/usr/local/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/temurin-17-jdk-amd64/lib/server:/opt/R/4.4.2/lib/R/lib:/usr/local/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/temurin-17-jdk-amd64/lib/server
LN_S                    ln -s
LOGGER_LOG_LEVEL        DEBUG
MAKE                    make
MEMORY_PRESSURE_WATCH   /sys/fs/cgroup/system.slice/runner-provisioner.service/memory.pressure
MEMORY_PRESSURE_WRITE   c29tZSAyMDAwMDAgMjAwMDAwMAA=
NOT_CRAN                true
NVM_DIR                 /home/runner/.nvm
PAGER                   /usr/bin/pager
PATH                    /snap/bin:/home/runner/.local/bin:/opt/pipx_bin:/home/runner/.cargo/bin:/home/runner/.config/composer/vendor/bin:/usr/local/.ghcup/bin:/home/runner/.dotnet/tools:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
PERFLOG_LOCATION_SETTING
                        RUNNER_PERFLOG
PHARMAPKGS_EXCLUDED_METRICS
                        assess_covr_coverage,assess_r_cmd_check
PHARMAPKGS_LIMIT        1000
PHARMAPKGS_PLATFORM     ubuntu-22.04
PHARMAPKGS_R_VERSION    4.4
PHARMAPKGS_REMOTE_REPO
                        https://cloud.r-project.org/
PIPX_BIN_DIR            /opt/pipx_bin
PIPX_HOME               /opt/pipx
PKGCACHE_HTTP_VERSION   2
PKGLOAD_PARENT_TEMPDIR
                        /tmp/RtmpjxUEUq
POWERSHELL_DISTRIBUTION_CHANNEL
                        GitHub-Actions-ubuntu24
PROCESSX_PS1bd62f223e61_1739768874
                        YES
PWD                     /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_BIN_PATH         /opt/quarto/bin
QUARTO_DENO             /opt/quarto/bin/tools/x86_64/deno
QUARTO_DOCUMENT_PATH    /home/runner/work/pharmapkgs/pharmapkgs/inst/report
QUARTO_PROFILE          
QUARTO_PROJECT_DIR      /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_PROJECT_ROOT     /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_ROOT             /
QUARTO_SHARE_PATH       /opt/quarto/share
R_ARCH                  
R_BROWSER               xdg-open
R_BZIPCMD               /usr/bin/bzip2
R_DOC_DIR               /opt/R/4.4.2/lib/R/doc
R_GZIPCMD               /usr/bin/gzip
R_HOME                  /opt/R/4.4.2/lib/R
R_INCLUDE_DIR           /opt/R/4.4.2/lib/R/include
R_LIB_FOR_PAK           /opt/R/4.4.2/lib/R/site-library
R_LIBS_SITE             /opt/R/4.4.2/lib/R/site-library
R_LIBS_USER             /home/runner/work/_temp/Library
R_PAPERSIZE             letter
R_PAPERSIZE_USER        letter
R_PDFVIEWER             /usr/bin/xdg-open
R_PLATFORM              x86_64-pc-linux-gnu
R_PRINTCMD              /usr/bin/lpr
R_RD4PDF                times,inconsolata,hyper
R_SESSION_TMPDIR        /tmp/RtmpcDL3uq
R_SHARE_DIR             /opt/R/4.4.2/lib/R/share
R_STRIP_SHARED_LIB      strip --strip-unneeded
R_STRIP_STATIC_LIB      strip --strip-debug
R_TEXI2DVICMD           /usr/bin/texi2dvi
R_UNZIPCMD              /usr/bin/unzip
R_ZIPCMD                /usr/bin/zip
RUNNER_ARCH             X64
RUNNER_ENVIRONMENT      github-hosted
RUNNER_NAME             GitHub Actions 16
RUNNER_OS               Linux
RUNNER_PERFLOG          /home/runner/perflog
RUNNER_TEMP             /home/runner/work/_temp
RUNNER_TOOL_CACHE       /opt/hostedtoolcache
RUNNER_TRACKING_ID      github_84602b48-6461-4335-a438-3ca558c890e8
RUNNER_USER             runner
RUNNER_WORKSPACE        /home/runner/work/pharmapkgs
SED                     /usr/bin/sed
SELENIUM_JAR_PATH       /usr/share/java/selenium-server.jar
SGX_AESM_ADDR           1
SHLVL                   1
STATS_D                 true
STATS_D_D               true
STATS_D_TC              true
STATS_EXT               true
STATS_EXTP              https://provjobdprod.z13.web.core.windows.net/settings/provjobdsettings-latest/provjobd.data
STATS_PIP               false
STATS_RDCL              true
STATS_TRP               true
STATS_UE                true
STATS_V3PS              true
STATS_VMD               true
STATS_VMFE              true
SWIFT_PATH              /usr/share/swift/usr/bin
SYSTEMD_EXEC_PID        830
TAR                     /usr/bin/tar
TZ                      UTC
USER                    runner
VCPKG_INSTALLATION_ROOT
                        /usr/local/share/vcpkg
XDG_CONFIG_HOME         /home/runner/.config
XDG_RUNTIME_DIR         /run/user/1001

These are the options set to generate the report:

$add.smooth
[1] TRUE

$bitmapType
[1] "cairo"

$browser
[1] "xdg-open"

$browserNLdisabled
[1] FALSE

$callr.condition_handler_cli_message
function (msg) 
{
    custom_handler <- getOption("cli.default_handler")
    if (is.function(custom_handler)) {
        custom_handler(msg)
    }
    else {
        cli_server_default(msg)
    }
}
<bytecode: 0x55d303bda910>
<environment: namespace:cli>

$catch.script.errors
[1] FALSE

$CBoundsCheck
[1] FALSE

$check.bounds
[1] FALSE

$citation.bibtex.max
[1] 1

$continue
[1] "+ "

$contrasts
        unordered           ordered 
"contr.treatment"      "contr.poly" 

$covr.record_tests
[1] TRUE

$defaultPackages
[1] "datasets"  "utils"     "grDevices" "graphics"  "stats"     "methods"  

$demo.ask
[1] "default"

$deparse.cutoff
[1] 60

$device
function (width = 7, height = 7, ...) 
{
    grDevices::pdf(NULL, width, height, ...)
}
<bytecode: 0x55d3032a1620>
<environment: namespace:knitr>

$device.ask.default
[1] FALSE

$digits
[1] 7

$dvipscmd
[1] "dvips"

$echo
[1] FALSE

$editor
[1] "vi"

$encoding
[1] "native.enc"

$example.ask
[1] "default"

$expressions
[1] 5000

$help.search.types
[1] "vignette" "demo"     "help"    

$help.try.all.packages
[1] FALSE

$htmltools.preserve.raw
[1] TRUE

$HTTPUserAgent
[1] "R/4.4.2 R (4.4.2 x86_64-pc-linux-gnu x86_64 linux-gnu) on GitHub Actions"

$internet.info
[1] 2

$keep.parse.data
[1] TRUE

$keep.parse.data.pkgs
[1] FALSE

$keep.source
[1] FALSE

$keep.source.pkgs
[1] FALSE

$knitr.in.progress
[1] TRUE

$locatorBell
[1] TRUE

$mailer
[1] "mailto"

$matprod
[1] "default"

$max.contour.segments
[1] 25000

$max.print
[1] 99999

$menu.graphics
[1] TRUE

$na.action
[1] "na.omit"

$Ncpus
[1] 1

$nwarnings
[1] 50

$OutDec
[1] "."

$pager
[1] "/opt/R/4.4.2/lib/R/bin/pager"

$papersize
[1] "letter"

$PCRE_limit_recursion
[1] NA

$PCRE_study
[1] FALSE

$PCRE_use_JIT
[1] TRUE

$pdfviewer
[1] "/usr/bin/xdg-open"

$pkgType
[1] "source"

$printcmd
[1] "/usr/bin/lpr"

$prompt
[1] "> "

$repos
                      CRAN 
"https://cran.rstudio.com" 

$rl_word_breaks
[1] " \t\n\"\\'`><=%;,|&{()}"

$rlang_trace_top_env
<environment: R_GlobalEnv>

$scipen
[1] 0

$show.coef.Pvalues
[1] TRUE

$show.error.messages
[1] TRUE

$show.signif.stars
[1] TRUE

$showErrorCalls
[1] TRUE

$showNCalls
[1] 50

$showWarnCalls
[1] FALSE

$str
$str$strict.width
[1] "no"

$str$digits.d
[1] 3

$str$vec.len
[1] 4

$str$list.len
[1] 99

$str$deparse.lines
NULL

$str$drop.deparse.attr
[1] TRUE

$str$formatNum
function (x, ...) 
format(x, trim = TRUE, drop0trailing = TRUE, ...)
<environment: 0x55d3030b2520>


$str.dendrogram.last
[1] "`"

$texi2dvi
[1] "/usr/bin/texi2dvi"

$tikzMetricsDictionary
[1] "validation_report_dbplyr_v2.5.0-tikzDictionary"

$timeout
[1] 60

$try.outFile
A connection with                    
description ""      
class       "file"  
mode        "w+b"   
text        "binary"
opened      "opened"
can read    "yes"   
can write   "yes"   

$ts.eps
[1] 1e-05

$ts.S.compat
[1] FALSE

$unzip
[1] "/usr/bin/unzip"

$useFancyQuotes
[1] FALSE

$verbose
[1] FALSE

$warn
[1] 0

$warning.length
[1] 1000

$warnPartialMatchArgs
[1] FALSE

$warnPartialMatchAttr
[1] FALSE

$warnPartialMatchDollar
[1] FALSE

$width
[1] 80