Validation Report - bit64@4.6.0.1

Context

This report is fully automated and builds on rhub/ref-image image. Documents the installation of this package on an open source R environment, focusing on:

  • Installation environment description
  • Testing coverage

It is limited to assess whether unit tests and documentation are present and can execute without error. An assessment would be required that the tests and documentation are meaningful.

Package bit64

Metric based risk assessment

The following metrics are derived from the riskmetric R package.

has_news 0
exported_namespace 232
has_vignettes 3
export_help 232
has_website TRUE
has_maintainer Michael Chirico
bugs_status package DESCRIPTION does not have a BugReports field
has_source_control https://github.com/r-lib/bit64
has_bug_reports_url 0
downloads_1yr 7930201
reverse_dependencies 106
has_examples 1
dependencies 5
license GPL-2 | GPL-3

Package general assessment: Coverage, check results, size, download the last year, reverse dependencies and number of dependencies.

Dependencies

Overall the package has these dependencies:

package type
1 bit (>= 4.0.0) Depends
2 graphics Imports
3 methods Imports
4 stats Imports
5 utils Imports

Package dependencies

Reverse dependencies

Overall the package has 106 reverse dependencies:

adbi, allofus, antaresRead, arrow, artMS, autonomics, AzureKusto, bigrquery, bigrquerystorage, bit, boxr, BrokenAdaptiveRidge, collapse, connectapi, constructive, cooltools, ctmm, CVXR, Cyclops, data.table, DatabaseConnector, dataCompareR, dbi.table, dbplyr, DIAlignR, diffdf, disk.frame, dittodb, docore, DrugUtilisation, dtts, duckdb, editbl, epitweetr, fbRads, filearray, framecleaner, fst, gdalraster, gemma.R, growthcleanr, GSODR, gtfs2gps, h2o, hdf5r, hdfqlr, heims, hilbert, iml, influxdbclient, IONiseR, ivs, lazytrade, LSPFP, mlr, mlr3oml, move2, nanoarrow, nanoparquet, nanotime, noctua, occCite, odbc, omopgenerics, panstarrs, pillar, ptairMS, pvLRT, RAthena, ravetools, rbedrock, RcppFarmHash, RcppInt64, RcppSimdJson, Rdiagnosislist, rdwd, readNSx, RGoogleFit, rhdf5, rio, RITCH, RMariaDB, RNetCDF, RPostgres, RPresto, RSQLite, rtweet, s2, santoku, scales, sergeant, shinyHugePlot, shinylogs, snapcount, tibble, tidytable, tiledb, torch, TreeTools, ukbnmr, vctrs, vroom, waldo, whSample, writexl, yyjsonr

Namespace

Overall the package has 232 exported objects. 227 are documented:

             -.integer64                        :                :.default 
                    TRUE                     TRUE                     TRUE 
             :.integer64              !.integer64             !=.integer64 
                    TRUE                     TRUE                     TRUE 
             [.integer64             [[.integer64           [[<-.integer64 
                    TRUE                     TRUE                     TRUE 
           [<-.integer64              *.integer64              /.integer64 
                    TRUE                     TRUE                     TRUE 
             &.integer64            %/%.integer64             %%.integer64 
                    TRUE                    FALSE                    FALSE 
                    %in%             %in%.default           %in%.integer64 
                   FALSE                    FALSE                    FALSE 
             ^.integer64              +.integer64              <.integer64 
                    TRUE                     TRUE                     TRUE 
            <=.integer64             ==.integer64              >.integer64 
                    TRUE                     TRUE                     TRUE 
            >=.integer64              |.integer64            abs.integer64 
                    TRUE                     TRUE                     TRUE 
     all.equal.integer64            all.integer64            any.integer64 
                    TRUE                     TRUE                     TRUE 
            as.bitstring   as.bitstring.integer64   as.character.integer64 
                    TRUE                     TRUE                     TRUE 
 as.data.frame.integer64      as.double.integer64     as.integer.integer64 
                    TRUE                     TRUE                     TRUE 
            as.integer64   as.integer64.bitstring   as.integer64.character 
                    TRUE                     TRUE                     TRUE 
     as.integer64.double      as.integer64.factor     as.integer64.integer 
                    TRUE                     TRUE                     TRUE 
  as.integer64.integer64     as.integer64.logical        as.integer64.NULL 
                    TRUE                     TRUE                     TRUE 
       as.list.integer64     as.logical.integer64              benchmark64 
                    TRUE                     TRUE                     TRUE 
                 binattr              c.integer64                    cache 
                    TRUE                     TRUE                     TRUE 
         cbind.integer64        ceiling.integer64                  colSums 
                    TRUE                     TRUE                     TRUE 
        cummax.integer64         cummin.integer64        cumprod.integer64 
                    TRUE                     TRUE                     TRUE 
        cumsum.integer64           diff.integer64     duplicated.integer64 
                    TRUE                     TRUE                     TRUE 
         floor.integer64         format.integer64                 getcache 
                    TRUE                     TRUE                     TRUE 
               hashcache                  hashdup  hashdup.cache_integer64 
                    TRUE                     TRUE                     TRUE 
                 hashfin  hashfin.cache_integer64                  hashfun 
                    TRUE                     TRUE                     TRUE 
       hashfun.integer64                  hashmap        hashmap.integer64 
                    TRUE                     TRUE                     TRUE 
              hashmaptab     hashmaptab.integer64               hashmapuni 
                    TRUE                     TRUE                     TRUE 
    hashmapuni.integer64               hashmapupo     hashmapupo.integer64 
                    TRUE                     TRUE                     TRUE 
                 hashpos  hashpos.cache_integer64                  hashrev 
                    TRUE                     TRUE                     TRUE 
 hashrev.cache_integer64                  hashrin  hashrin.cache_integer64 
                    TRUE                     TRUE                     TRUE 
                 hashtab  hashtab.cache_integer64                  hashuni 
                    TRUE                     TRUE                     TRUE 
 hashuni.cache_integer64                  hashupo  hashupo.cache_integer64 
                    TRUE                     TRUE                     TRUE 
     identical.integer64                integer64                is.double 
                    TRUE                     TRUE                     TRUE 
       is.double.default      is.double.integer64      is.finite.integer64 
                    TRUE                     TRUE                     TRUE 
   is.infinite.integer64             is.integer64          is.na.integer64 
                    TRUE                     TRUE                     TRUE 
        is.nan.integer64      is.sorted.integer64      is.vector.integer64 
                    TRUE                     TRUE                     TRUE 
                jamcache                   keypos         keypos.integer64 
                    TRUE                     TRUE                     TRUE 
      length<-.integer64            lim.integer64            log.integer64 
                    TRUE                     TRUE                     TRUE 
         log10.integer64           log2.integer64                    match 
                    TRUE                     TRUE                     TRUE 
           match.default          match.integer64            max.integer64 
                    TRUE                     TRUE                     TRUE 
          mean.integer64         median.integer64     mergeorder.integer64 
                    TRUE                     TRUE                     TRUE 
     mergesort.integer64 mergesortorder.integer64            min.integer64 
                    TRUE                     TRUE                     TRUE 
              minusclass            NA_integer64_       na.count.integer64 
                    TRUE                     TRUE                     TRUE 
                newcache          nties.integer64        nunique.integer64 
                    TRUE                     TRUE                     TRUE 
        nvalid.integer64              optimizer64                    order 
                    TRUE                     TRUE                     TRUE 
           order.default          order.integer64               ordercache 
                    TRUE                     TRUE                     TRUE 
                orderdup       orderdup.integer64                 orderfin 
                    TRUE                     TRUE                     TRUE 
      orderfin.integer64                 orderkey       orderkey.integer64 
                    TRUE                     TRUE                     TRUE 
                ordernut       ordernut.integer64                 orderpos 
                    TRUE                     TRUE                     TRUE 
      orderpos.integer64                 orderqtl       orderqtl.integer64 
                    TRUE                     TRUE                     TRUE 
                orderrnk       orderrnk.integer64                 ordertab 
                    TRUE                     TRUE                     TRUE 
      ordertab.integer64                 ordertie       ordertie.integer64 
                    TRUE                     TRUE                     TRUE 
                orderuni       orderuni.integer64                 orderupo 
                    TRUE                     TRUE                     TRUE 
      orderupo.integer64                plusclass                    prank 
                    TRUE                     TRUE                     TRUE 
         prank.integer64          print.bitstring              print.cache 
                    TRUE                     TRUE                     TRUE 
         print.integer64           prod.integer64                    qtile 
                    TRUE                     TRUE                     TRUE 
         qtile.integer64       quantile.integer64     quickorder.integer64 
                    TRUE                     TRUE                     TRUE 
     quicksort.integer64 quicksortorder.integer64     radixorder.integer64 
                    TRUE                     TRUE                     TRUE 
     radixsort.integer64 radixsortorder.integer64       ramorder.integer64 
                    TRUE                     TRUE                     TRUE 
       ramsort.integer64   ramsortorder.integer64          range.integer64 
                    TRUE                     TRUE                     TRUE 
                    rank             rank.default           rank.integer64 
                    TRUE                     TRUE                     TRUE 
         rbind.integer64                 remcache            rep.integer64 
                    TRUE                     TRUE                     TRUE 
         round.integer64                  rowSums                  runif64 
                    TRUE                     TRUE                     TRUE 
         scale.integer64            seq.integer64                 setcache 
                    TRUE                     TRUE                     TRUE 
    shellorder.integer64      shellsort.integer64 shellsortorder.integer64 
                    TRUE                     TRUE                     TRUE 
          sign.integer64         signif.integer64           sort.integer64 
                    TRUE                     TRUE                     TRUE 
               sortcache                  sortfin        sortfin.integer64 
                    TRUE                     TRUE                     TRUE 
                 sortnut        sortnut.integer64           sortordercache 
                    TRUE                     TRUE                     TRUE 
            sortorderdup   sortorderdup.integer64             sortorderkey 
                    TRUE                     TRUE                     TRUE 
  sortorderkey.integer64             sortorderpos   sortorderpos.integer64 
                    TRUE                     TRUE                     TRUE 
            sortorderrnk   sortorderrnk.integer64             sortordertab 
                    TRUE                     TRUE                     TRUE 
  sortordertab.integer64             sortordertie   sortordertie.integer64 
                    TRUE                     TRUE                     TRUE 
            sortorderuni   sortorderuni.integer64             sortorderupo 
                    TRUE                     TRUE                     TRUE 
  sortorderupo.integer64                  sortqtl        sortqtl.integer64 
                    TRUE                     TRUE                     TRUE 
                 sorttab        sorttab.integer64                  sortuni 
                    TRUE                     TRUE                     TRUE 
       sortuni.integer64           sqrt.integer64            str.integer64 
                    TRUE                     TRUE                     TRUE 
           sum.integer64        summary.integer64          table.integer64 
                    TRUE                     TRUE                     TRUE 
                  tiepos         tiepos.integer64          trunc.integer64 
                    TRUE                     TRUE                     TRUE 
                  unipos         unipos.integer64         unique.integer64 
                    TRUE                     TRUE                     TRUE 
           xor.integer64 
                    TRUE 

Examples

There are 37 help pages with examples, from 37 (100.00 %).

NEWS

The package has NEWS file and it is current.

License

The package uses .

Installation environment

System Info

Field Value
Image rhub/ref-image
OS Ubuntu 24.04.1 LTS
Platform x86_64-pc-linux-gnu
System x86_64, linux-gnu
Execution Time 2025-02-22 03:17:29 UTC

System information. Table about the system used to check the package.

R Session Info

Information about the R environment and capabilities:

R version 4.4.2 (2024-10-31)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 24.04.1 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.26.so;  LAPACK version 3.12.0

locale:
 [1] LC_CTYPE=C.UTF-8       LC_NUMERIC=C           LC_TIME=C.UTF-8       
 [4] LC_COLLATE=C.UTF-8     LC_MONETARY=C.UTF-8    LC_MESSAGES=C.UTF-8   
 [7] LC_PAPER=C.UTF-8       LC_NAME=C              LC_ADDRESS=C          
[10] LC_TELEPHONE=C         LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C   

time zone: UTC
tzcode source: system (glibc)

attached base packages:
[1] tools     stats     graphics  grDevices utils     datasets  methods  
[8] base     

loaded via a namespace (and not attached):
 [1] riskreports_0.0.0.9003 compiler_4.4.2         fastmap_1.2.0         
 [4] cli_3.6.4              htmltools_0.5.8.1      yaml_2.3.10           
 [7] rmarkdown_2.29         knitr_1.49             jsonlite_1.9.0        
[10] xfun_0.51              digest_0.6.37          rlang_1.1.5           
[13] evaluate_1.0.3        

Platform used:

   OS.type   file.sep dynlib.ext        GUI     endian    pkgType   path.sep 
    "unix"        "/"      ".so"      "X11"   "little"   "source"        ":" 
    r_arch 
        "" 

R’s capabilities:

       jpeg         png        tiff       tcltk         X11        aqua 
       TRUE        TRUE        TRUE        TRUE       FALSE       FALSE 
   http/ftp     sockets      libxml        fifo      cledit       iconv 
       TRUE        TRUE       FALSE        TRUE       FALSE        TRUE 
        NLS       Rprof     profmem       cairo         ICU long.double 
       TRUE        TRUE        TRUE        TRUE        TRUE        TRUE 
    libcurl 
       TRUE 

External software:

                                                     zlib 
                                                    "1.3" 
                                                    bzlib 
                                     "1.0.8, 13-Jul-2019" 
                                                       xz 
                                                  "5.4.5" 
                                               libdeflate 
                                                   "1.19" 
                                                     PCRE 
                                       "10.42 2022-12-11" 
                                                      ICU 
                                                   "74.2" 
                                                      TRE 
                                "TRE 0.8.0 R_fixes (BSD)" 
                                                    iconv 
                                             "glibc 2.39" 
                                                 readline 
                                                    "8.2" 
                                                     BLAS 
"/usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3" 

Graphics external software:

                   cairo                  cairoFT                    pango 
                "1.18.0"                       ""                 "1.52.1" 
                  libpng                     jpeg                  libtiff 
                "1.6.43"                    "8.0" "LIBTIFF, Version 4.5.1" 

Numerical characteristics of the machine:

               double.eps            double.neg.eps               double.xmin 
             2.220446e-16              1.110223e-16             2.225074e-308 
              double.xmax               double.base             double.digits 
            1.797693e+308              2.000000e+00              5.300000e+01 
          double.rounding              double.guard         double.ulp.digits 
             5.000000e+00              0.000000e+00             -5.200000e+01 
    double.neg.ulp.digits           double.exponent            double.min.exp 
            -5.300000e+01              1.100000e+01             -1.022000e+03 
           double.max.exp               integer.max               sizeof.long 
             1.024000e+03              2.147484e+09              8.000000e+00 
          sizeof.longlong         sizeof.longdouble            sizeof.pointer 
             8.000000e+00              1.600000e+01              8.000000e+00 
            sizeof.time_t            longdouble.eps        longdouble.neg.eps 
             8.000000e+00              1.084202e-19              5.421011e-20 
        longdouble.digits       longdouble.rounding          longdouble.guard 
             6.400000e+01              5.000000e+00              0.000000e+00 
    longdouble.ulp.digits longdouble.neg.ulp.digits       longdouble.exponent 
            -6.300000e+01             -6.400000e+01              1.500000e+01 
       longdouble.min.exp        longdouble.max.exp 
            -1.638200e+04              1.638400e+04 

Random number generation process:

[1] "Mersenne-Twister" "Inversion"        "Rejection"       

Information about the environment

Environmental and options variables affect how package checks and software in it might behave. Here is the environmental variables when running this report

_R_CHECK_SYSTEM_CLOCK_
                        FALSE
ACCEPT_EULA             Y
ACTIONS_RUNNER_ACTION_ARCHIVE_CACHE
                        /opt/actionarchivecache
AGENT_TOOLSDIRECTORY    /opt/hostedtoolcache
ANDROID_HOME            /usr/local/lib/android/sdk
ANDROID_NDK             /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_HOME        /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_LATEST_HOME
                        /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_ROOT        /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_SDK_ROOT        /usr/local/lib/android/sdk
ANT_HOME                /usr/share/ant
AZURE_EXTENSION_DIR     /opt/az/azcliextensions
BOOTSTRAP_HASKELL_NONINTERACTIVE
                        1
BUNDLE_EXT              linux-amd64.deb
CHROME_BIN              /usr/bin/google-chrome
CHROMEWEBDRIVER         /usr/local/share/chromedriver-linux64
CI                      true
CONDA                   /usr/share/miniconda
DEBIAN_FRONTEND         noninteractive
DENO_DOM_PLUGIN         /opt/quarto/bin/tools/x86_64/deno_dom/libplugin.so
DENO_NO_UPDATE_CHECK    1
DENO_TLS_CA_STORE       system,mozilla
DEPLOYMENT_BASEPATH     /opt/runner
DOTNET_MULTILEVEL_LOOKUP
                        0
DOTNET_NOLOGO           1
DOTNET_SKIP_FIRST_TIME_EXPERIENCE
                        1
EDGEWEBDRIVER           /usr/local/share/edge_driver
EDITOR                  vi
GECKOWEBDRIVER          /usr/local/share/gecko_driver
GHCUP_INSTALL_BASE_PREFIX
                        /usr/local
GITHUB_ACTION           __run
GITHUB_ACTION_REF       
GITHUB_ACTION_REPOSITORY
                        
GITHUB_ACTIONS          true
GITHUB_ACTOR            llrs-roche
GITHUB_ACTOR_ID         185338939
GITHUB_API_URL          https://api.github.com
GITHUB_BASE_REF         
GITHUB_ENV              /home/runner/work/_temp/_runner_file_commands/set_env_058c26cd-d6b5-4ab6-99c5-e0aa48adc255
GITHUB_EVENT_NAME       schedule
GITHUB_EVENT_PATH       /home/runner/work/_temp/_github_workflow/event.json
GITHUB_GRAPHQL_URL      https://api.github.com/graphql
GITHUB_HEAD_REF         
GITHUB_JOB              main
GITHUB_OUTPUT           /home/runner/work/_temp/_runner_file_commands/set_output_058c26cd-d6b5-4ab6-99c5-e0aa48adc255
GITHUB_PATH             /home/runner/work/_temp/_runner_file_commands/add_path_058c26cd-d6b5-4ab6-99c5-e0aa48adc255
GITHUB_REF              refs/heads/main
GITHUB_REF_NAME         main
GITHUB_REF_PROTECTED    false
GITHUB_REF_TYPE         branch
GITHUB_REPOSITORY       pharmaR/pharmapkgs
GITHUB_REPOSITORY_ID    798326913
GITHUB_REPOSITORY_OWNER
                        pharmaR
GITHUB_REPOSITORY_OWNER_ID
                        42115094
GITHUB_RETENTION_DAYS   90
GITHUB_RUN_ATTEMPT      1
GITHUB_RUN_ID           13469038660
GITHUB_RUN_NUMBER       102
GITHUB_SERVER_URL       https://github.com
GITHUB_SHA              2762e9764ccb07e23afdc6b4d96bc300f1ce9b9d
GITHUB_STATE            /home/runner/work/_temp/_runner_file_commands/save_state_058c26cd-d6b5-4ab6-99c5-e0aa48adc255
GITHUB_STEP_SUMMARY     /home/runner/work/_temp/_runner_file_commands/step_summary_058c26cd-d6b5-4ab6-99c5-e0aa48adc255
GITHUB_TRIGGERING_ACTOR
                        llrs-roche
GITHUB_WORKFLOW         Update package repositories
GITHUB_WORKFLOW_REF     pharmaR/pharmapkgs/.github/workflows/update-repos.yml@refs/heads/main
GITHUB_WORKFLOW_SHA     2762e9764ccb07e23afdc6b4d96bc300f1ce9b9d
GITHUB_WORKSPACE        /home/runner/work/pharmapkgs/pharmapkgs
GOROOT_1_21_X64         /opt/hostedtoolcache/go/1.21.13/x64
GOROOT_1_22_X64         /opt/hostedtoolcache/go/1.22.12/x64
GOROOT_1_23_X64         /opt/hostedtoolcache/go/1.23.6/x64
GRADLE_HOME             /usr/share/gradle-8.12.1
HOME                    /home/runner
HOMEBREW_CLEANUP_PERIODIC_FULL_DAYS
                        3650
HOMEBREW_NO_AUTO_UPDATE
                        1
ImageOS                 ubuntu24
ImageVersion            20250209.1.0
INVOCATION_ID           8bd3165f7e264726a5af349b42c1132e
JAVA_HOME               /usr/lib/jvm/temurin-17-jdk-amd64
JAVA_HOME_11_X64        /usr/lib/jvm/temurin-11-jdk-amd64
JAVA_HOME_17_X64        /usr/lib/jvm/temurin-17-jdk-amd64
JAVA_HOME_21_X64        /usr/lib/jvm/temurin-21-jdk-amd64
JAVA_HOME_8_X64         /usr/lib/jvm/temurin-8-jdk-amd64
JOURNAL_STREAM          8:5911
LANG                    C.UTF-8
LD_LIBRARY_PATH         /opt/R/4.4.2/lib/R/lib:/usr/local/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/temurin-17-jdk-amd64/lib/server:/opt/R/4.4.2/lib/R/lib:/usr/local/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/temurin-17-jdk-amd64/lib/server
LN_S                    ln -s
LOGGER_LOG_LEVEL        DEBUG
MAKE                    make
MEMORY_PRESSURE_WATCH   /sys/fs/cgroup/system.slice/runner-provisioner.service/memory.pressure
MEMORY_PRESSURE_WRITE   c29tZSAyMDAwMDAgMjAwMDAwMAA=
NOT_CRAN                true
NVM_DIR                 /home/runner/.nvm
PAGER                   /usr/bin/pager
PATH                    /snap/bin:/home/runner/.local/bin:/opt/pipx_bin:/home/runner/.cargo/bin:/home/runner/.config/composer/vendor/bin:/usr/local/.ghcup/bin:/home/runner/.dotnet/tools:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
PERFLOG_LOCATION_SETTING
                        RUNNER_PERFLOG
PHARMAPKGS_EXCLUDED_METRICS
                        assess_covr_coverage,assess_r_cmd_check
PHARMAPKGS_LIMIT        100
PHARMAPKGS_PLATFORM     ubuntu-22.04
PHARMAPKGS_R_VERSION    4.4
PHARMAPKGS_REMOTE_REPO
                        https://cloud.r-project.org/
PIPX_BIN_DIR            /opt/pipx_bin
PIPX_HOME               /opt/pipx
PKGCACHE_HTTP_VERSION   2
PKGLOAD_PARENT_TEMPDIR
                        /tmp/RtmpazFpm9
POWERSHELL_DISTRIBUTION_CHANNEL
                        GitHub-Actions-ubuntu24
PROCESSX_PS1dbb4df5cc5e_1740194245
                        YES
PWD                     /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_BIN_PATH         /opt/quarto/bin
QUARTO_DENO             /opt/quarto/bin/tools/x86_64/deno
QUARTO_DOCUMENT_PATH    /home/runner/work/pharmapkgs/pharmapkgs/inst/report
QUARTO_PROFILE          
QUARTO_PROJECT_DIR      /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_PROJECT_ROOT     /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_ROOT             /
QUARTO_SHARE_PATH       /opt/quarto/share
R_ARCH                  
R_BROWSER               xdg-open
R_BZIPCMD               /usr/bin/bzip2
R_DOC_DIR               /opt/R/4.4.2/lib/R/doc
R_GZIPCMD               /usr/bin/gzip
R_HOME                  /opt/R/4.4.2/lib/R
R_INCLUDE_DIR           /opt/R/4.4.2/lib/R/include
R_LIB_FOR_PAK           /opt/R/4.4.2/lib/R/site-library
R_LIBS_SITE             /opt/R/4.4.2/lib/R/site-library
R_LIBS_USER             /home/runner/work/_temp/Library
R_PAPERSIZE             letter
R_PAPERSIZE_USER        letter
R_PDFVIEWER             /usr/bin/xdg-open
R_PLATFORM              x86_64-pc-linux-gnu
R_PRINTCMD              /usr/bin/lpr
R_RD4PDF                times,inconsolata,hyper
R_SESSION_TMPDIR        /tmp/RtmpdFJaap
R_SHARE_DIR             /opt/R/4.4.2/lib/R/share
R_STRIP_SHARED_LIB      strip --strip-unneeded
R_STRIP_STATIC_LIB      strip --strip-debug
R_TEXI2DVICMD           /usr/bin/texi2dvi
R_UNZIPCMD              /usr/bin/unzip
R_ZIPCMD                /usr/bin/zip
RUNNER_ARCH             X64
RUNNER_ENVIRONMENT      github-hosted
RUNNER_NAME             GitHub Actions 6
RUNNER_OS               Linux
RUNNER_PERFLOG          /home/runner/perflog
RUNNER_TEMP             /home/runner/work/_temp
RUNNER_TOOL_CACHE       /opt/hostedtoolcache
RUNNER_TRACKING_ID      github_22b6cff0-eea4-4f3a-9199-a747a1c52b9d
RUNNER_USER             runner
RUNNER_WORKSPACE        /home/runner/work/pharmapkgs
SED                     /usr/bin/sed
SELENIUM_JAR_PATH       /usr/share/java/selenium-server.jar
SGX_AESM_ADDR           1
SHLVL                   1
STATS_D                 true
STATS_D_D               true
STATS_D_TC              true
STATS_EXT               true
STATS_EXTP              https://provjobdprod.z13.web.core.windows.net/settings/provjobdsettings-latest/provjobd.data
STATS_PIP               false
STATS_RDCL              true
STATS_TRP               true
STATS_UE                true
STATS_V3PS              true
STATS_VMD               true
STATS_VMFE              true
SWIFT_PATH              /usr/share/swift/usr/bin
SYSTEMD_EXEC_PID        833
TAR                     /usr/bin/tar
TZ                      UTC
USER                    runner
VCPKG_INSTALLATION_ROOT
                        /usr/local/share/vcpkg
XDG_CONFIG_HOME         /home/runner/.config
XDG_RUNTIME_DIR         /run/user/1001

These are the options set to generate the report:

$add.smooth
[1] TRUE

$bitmapType
[1] "cairo"

$browser
[1] "xdg-open"

$browserNLdisabled
[1] FALSE

$callr.condition_handler_cli_message
function (msg) 
{
    custom_handler <- getOption("cli.default_handler")
    if (is.function(custom_handler)) {
        custom_handler(msg)
    }
    else {
        cli_server_default(msg)
    }
}
<bytecode: 0x5576c2336910>
<environment: namespace:cli>

$catch.script.errors
[1] FALSE

$CBoundsCheck
[1] FALSE

$check.bounds
[1] FALSE

$citation.bibtex.max
[1] 1

$continue
[1] "+ "

$contrasts
        unordered           ordered 
"contr.treatment"      "contr.poly" 

$covr.record_tests
[1] TRUE

$defaultPackages
[1] "datasets"  "utils"     "grDevices" "graphics"  "stats"     "methods"  

$demo.ask
[1] "default"

$deparse.cutoff
[1] 60

$device
function (width = 7, height = 7, ...) 
{
    grDevices::pdf(NULL, width, height, ...)
}
<bytecode: 0x5576c19f91c0>
<environment: namespace:knitr>

$device.ask.default
[1] FALSE

$digits
[1] 7

$dvipscmd
[1] "dvips"

$echo
[1] FALSE

$editor
[1] "vi"

$encoding
[1] "native.enc"

$example.ask
[1] "default"

$expressions
[1] 5000

$help.search.types
[1] "vignette" "demo"     "help"    

$help.try.all.packages
[1] FALSE

$htmltools.preserve.raw
[1] TRUE

$HTTPUserAgent
[1] "R/4.4.2 R (4.4.2 x86_64-pc-linux-gnu x86_64 linux-gnu) on GitHub Actions"

$internet.info
[1] 2

$keep.parse.data
[1] TRUE

$keep.parse.data.pkgs
[1] FALSE

$keep.source
[1] FALSE

$keep.source.pkgs
[1] FALSE

$knitr.in.progress
[1] TRUE

$locatorBell
[1] TRUE

$mailer
[1] "mailto"

$matprod
[1] "default"

$max.contour.segments
[1] 25000

$max.print
[1] 99999

$menu.graphics
[1] TRUE

$na.action
[1] "na.omit"

$Ncpus
[1] 1

$nwarnings
[1] 50

$OutDec
[1] "."

$pager
[1] "/opt/R/4.4.2/lib/R/bin/pager"

$papersize
[1] "letter"

$PCRE_limit_recursion
[1] NA

$PCRE_study
[1] FALSE

$PCRE_use_JIT
[1] TRUE

$pdfviewer
[1] "/usr/bin/xdg-open"

$pkgType
[1] "source"

$printcmd
[1] "/usr/bin/lpr"

$prompt
[1] "> "

$repos
                      CRAN 
"https://cran.rstudio.com" 

$rl_word_breaks
[1] " \t\n\"\\'`><=%;,|&{()}"

$rlang_trace_top_env
<environment: R_GlobalEnv>

$scipen
[1] 0

$show.coef.Pvalues
[1] TRUE

$show.error.messages
[1] TRUE

$show.signif.stars
[1] TRUE

$showErrorCalls
[1] TRUE

$showNCalls
[1] 50

$showWarnCalls
[1] FALSE

$str
$str$strict.width
[1] "no"

$str$digits.d
[1] 3

$str$vec.len
[1] 4

$str$list.len
[1] 99

$str$deparse.lines
NULL

$str$drop.deparse.attr
[1] TRUE

$str$formatNum
function (x, ...) 
format(x, trim = TRUE, drop0trailing = TRUE, ...)
<environment: 0x5576c180e520>


$str.dendrogram.last
[1] "`"

$texi2dvi
[1] "/usr/bin/texi2dvi"

$tikzMetricsDictionary
[1] "validation_report_bit64_v4.6.0.1-tikzDictionary"

$timeout
[1] 60

$try.outFile
A connection with                    
description ""      
class       "file"  
mode        "w+b"   
text        "binary"
opened      "opened"
can read    "yes"   
can write   "yes"   

$ts.eps
[1] 1e-05

$ts.S.compat
[1] FALSE

$unzip
[1] "/usr/bin/unzip"

$useFancyQuotes
[1] FALSE

$verbose
[1] FALSE

$warn
[1] 0

$warning.length
[1] 1000

$warnPartialMatchArgs
[1] FALSE

$warnPartialMatchAttr
[1] FALSE

$warnPartialMatchDollar
[1] FALSE

$width
[1] 80