Validation Report - arrow@18.1.0.1

Context

This report is fully automated and builds on rhub/ref-image image. Documents the installation of this package on an open source R environment, focusing on:

  • Installation environment description
  • Testing coverage

It is limited to assess whether unit tests and documentation are present and can execute without error. An assessment would be required that the tests and documentation are meaningful.

Package arrow

Metric based risk assessment

The following metrics are derived from the riskmetric R package.

has_news 1
news_current TRUE
exported_namespace 240
has_vignettes 0
export_help 240
has_website TRUE
has_maintainer Jonathan Keane
bugs_status subscript out of bounds
size_codebase 13055
has_source_control https://github.com/apache/arrow/
has_bug_reports_url 1
downloads_1yr 3328410
reverse_dependencies 84
has_examples 0.740458
dependencies 12
license Apache License (>= 2.0)

Package general assessment: Coverage, check results, size, download the last year, reverse dependencies and number of dependencies.

Dependencies

Overall the package has these dependencies:

package type
1 assertthat Imports
2 bit64 (>= 0.9-7) Imports
3 glue Imports
4 methods Imports
5 purrr Imports
6 R6 Imports
7 rlang (>= 1.0.0) Imports
8 stats Imports
9 tidyselect (>= 1.0.0) Imports
10 utils Imports
11 vctrs Imports
12 cpp11 (>= 0.4.2) LinkingTo

Package dependencies

Reverse dependencies

Overall the package has 84 reverse dependencies:

adbi, analogsea, Andromeda, APCalign, arkdb, BayesSpace, brickster, capesR, censobr, ClickHouseHTTP, CuratedAtlasQueryR, dataverifyr, DBI, diffdfs, disk.frame, DominoDataR, dpkg, duckdb, duckplyr, ebirdst, EEAaq, epiCleanr, Eunomia, FaaSr, filecacher, finnts, foundry, gbifdb, geoarrow, geobr, geocodebr, geslaR, hubUtils, IGoRRR, inldata, lessR, mark, mintyr, MolgenisArmadillo, mrgsim.parallel, MSstatsBig, multimolang, nanoarrow, nanoparquet, nc, neonstore, nflreadr, nhdplusTools, noctua, OlinkAnalyze, OmicsMLRepoR, opencpu, orbital, overturemapsr, parqr, parquetize, pins, plumber, pointblank, pxmake, pysparklyr, r4ds.tutorials, radiant.data, RaMS, RAthena, RcisTarget, receptiviti, rio, Seurat, sfarrow, sooty, sparklyr, SpatialFeatureExperiment, SQL, starvz, strand, TestGenerator, tidyquery, tiledb, tximport, vetiver, VisiumIO, Voyager, xenLite

Namespace

Overall the package has 240 exported objects. 240 are documented:

                              all_of                                Array 
                                TRUE                                 TRUE 
                         arrow_array                      arrow_available 
                                TRUE                                 TRUE 
                          arrow_info                          arrow_table 
                                TRUE                                 TRUE 
                    arrow_with_acero                   arrow_with_dataset 
                                TRUE                                 TRUE 
                      arrow_with_gcs                      arrow_with_json 
                                TRUE                                 TRUE 
                  arrow_with_parquet                        arrow_with_s3 
                                TRUE                                 TRUE 
                arrow_with_substrait                       as_arrow_array 
                                TRUE                                 TRUE 
                      as_arrow_table                     as_chunked_array 
                                TRUE                                 TRUE 
                        as_data_type                      as_record_batch 
                                TRUE                                 TRUE 
              as_record_batch_reader                            as_schema 
                                TRUE                                 TRUE 
                              binary                                 bool 
                                TRUE                                 TRUE 
                             boolean                               buffer 
                                TRUE                                 TRUE 
                              Buffer                   BufferOutputStream 
                                TRUE                                 TRUE 
                        BufferReader                        call_function 
                                TRUE                                 TRUE 
                        cast_options                        chunked_array 
                                TRUE                                 TRUE 
                        ChunkedArray                                Codec 
                                TRUE                                 TRUE 
                  codec_is_available                CompressedInputStream 
                                TRUE                                 TRUE 
              CompressedOutputStream                      CompressionType 
                                TRUE                                 TRUE 
                       concat_arrays                        concat_tables 
                                TRUE                                 TRUE 
                            contains                           copy_files 
                                TRUE                                 TRUE 
                           cpu_count create_package_with_all_dependencies 
                                TRUE                                 TRUE 
                 csv_convert_options                    csv_parse_options 
                                TRUE                                 TRUE 
                    csv_read_options                    csv_write_options 
                                TRUE                                 TRUE 
                   CsvConvertOptions                        CsvFileFormat 
                                TRUE                                 TRUE 
              CsvFragmentScanOptions                      CsvParseOptions 
                                TRUE                                 TRUE 
                      CsvReadOptions                       CsvTableReader 
                                TRUE                                 TRUE 
                     CsvWriteOptions                              Dataset 
                                TRUE                                 TRUE 
                     dataset_factory                       DatasetFactory 
                                TRUE                                 TRUE 
                              date32                               date64 
                                TRUE                                 TRUE 
                            DateUnit                              decimal 
                                TRUE                                 TRUE 
                          decimal128                           decimal256 
                                TRUE                                 TRUE 
                 default_memory_pool                           dictionary 
                                TRUE                                 TRUE 
                     DictionaryArray                DirectoryPartitioning 
                                TRUE                                 TRUE 
        DirectoryPartitioningFactory                             duration 
                                TRUE                                 TRUE 
                           ends_with                           everything 
                                TRUE                                 TRUE 
                          Expression                       ExtensionArray 
                                TRUE                                 TRUE 
                       ExtensionType                        FeatherReader 
                                TRUE                                 TRUE 
                               field                                Field 
                                TRUE                                 TRUE 
                          FileFormat                             FileInfo 
                                TRUE                                 TRUE 
                            FileMode                     FileOutputStream 
                                TRUE                                 TRUE 
                        FileSelector                           FileSystem 
                                TRUE                                 TRUE 
                   FileSystemDataset             FileSystemDatasetFactory 
                                TRUE                                 TRUE 
                            FileType                    fixed_size_binary 
                                TRUE                                 TRUE 
                  fixed_size_list_of                   FixedSizeListArray 
                                TRUE                                 TRUE 
                   FixedSizeListType                       flight_connect 
                                TRUE                                 TRUE 
                   flight_disconnect                           flight_get 
                                TRUE                                 TRUE 
                  flight_path_exists                           flight_put 
                                TRUE                                 TRUE 
                               float                              float16 
                                TRUE                                 TRUE 
                             float32                              float64 
                                TRUE                                 TRUE 
                 FragmentScanOptions                        GcsFileSystem 
                                TRUE                                 TRUE 
                           gs_bucket                            halffloat 
                                TRUE                                 TRUE 
                      hive_partition                     HivePartitioning 
                                TRUE                                 TRUE 
             HivePartitioningFactory                         infer_schema 
                                TRUE                                 TRUE 
                          infer_type                      InMemoryDataset 
                                TRUE                                 TRUE 
                       install_arrow                      install_pyarrow 
                                TRUE                                 TRUE 
                               int16                                int32 
                                TRUE                                 TRUE 
                               int64                                 int8 
                                TRUE                                 TRUE 
                     io_thread_count                        IpcFileFormat 
                                TRUE                                 TRUE 
                               is_in                             JoinType 
                                TRUE                                 TRUE 
                      JsonFileFormat              JsonFragmentScanOptions 
                                TRUE                                 TRUE 
                    JsonParseOptions                      JsonReadOptions 
                                TRUE                                 TRUE 
                     JsonTableReader                         large_binary 
                                TRUE                                 TRUE 
                       large_list_of                           large_utf8 
                                TRUE                                 TRUE 
                      LargeListArray                             last_col 
                                TRUE                                 TRUE 
              list_compute_functions                         list_flights 
                                TRUE                                 TRUE 
                             list_of                            ListArray 
                                TRUE                                 TRUE 
                  load_flight_server                      LocalFileSystem 
                                TRUE                                 TRUE 
                         map_batches                               map_of 
                                TRUE                                 TRUE 
                            MapArray                              MapType 
                                TRUE                                 TRUE 
                         match_arrow                              matches 
                                TRUE                                 TRUE 
                    MemoryMappedFile                        MessageReader 
                                TRUE                                 TRUE 
                         MessageType                      MetadataVersion 
                                TRUE                                 TRUE 
                         mmap_create                            mmap_open 
                                TRUE                                 TRUE 
                 new_extension_array                   new_extension_type 
                                TRUE                                 TRUE 
                                null                 NullEncodingBehavior 
                                TRUE                                 TRUE 
                NullHandlingBehavior                            num_range 
                                TRUE                                 TRUE 
                              one_of                     open_csv_dataset 
                                TRUE                                 TRUE 
                        open_dataset                   open_delim_dataset 
                                TRUE                                 TRUE 
                    open_tsv_dataset         ParquetArrowReaderProperties 
                                TRUE                                 TRUE 
                   ParquetFileFormat                    ParquetFileReader 
                                TRUE                                 TRUE 
                   ParquetFileWriter           ParquetFragmentScanOptions 
                                TRUE                                 TRUE 
             ParquetReaderProperties                   ParquetVersionType 
                                TRUE                                 TRUE 
             ParquetWriterProperties                         Partitioning 
                                TRUE                                 TRUE 
               QuantileInterpolation                     RandomAccessFile 
                                TRUE                                 TRUE 
                      read_csv_arrow                      read_csv2_arrow 
                                TRUE                                 TRUE 
                    read_delim_arrow                         read_feather 
                                TRUE                                 TRUE 
                       read_ipc_file                      read_ipc_stream 
                                TRUE                                 TRUE 
                     read_json_arrow                         read_message 
                                TRUE                                 TRUE 
                        read_parquet                          read_schema 
                                TRUE                                 TRUE 
                      read_tsv_arrow                         ReadableFile 
                                TRUE                                 TRUE 
                        record_batch                          RecordBatch 
                                TRUE                                 TRUE 
               RecordBatchFileReader                RecordBatchFileWriter 
                                TRUE                                 TRUE 
                   RecordBatchReader              RecordBatchStreamReader 
                                TRUE                                 TRUE 
             RecordBatchStreamWriter              register_extension_type 
                                TRUE                                 TRUE 
            register_scalar_function            reregister_extension_type 
                                TRUE                                 TRUE 
                           RoundMode                            s3_bucket 
                                TRUE                                 TRUE 
                        S3FileSystem                               scalar 
                                TRUE                                 TRUE 
                              Scalar                              Scanner 
                                TRUE                                 TRUE 
                      ScannerBuilder                               schema 
                                TRUE                                 TRUE 
                              Schema                        set_cpu_count 
                                TRUE                                 TRUE 
                 set_io_thread_count                       show_exec_plan 
                                TRUE                                 TRUE 
                         starts_with                           StatusCode 
                                TRUE                                 TRUE 
                              string                               struct 
                                TRUE                                 TRUE 
                         StructArray                         StructScalar 
                                TRUE                                 TRUE 
                   SubTreeFileSystem                                Table 
                                TRUE                                 TRUE 
                              time32                               time64 
                                TRUE                                 TRUE 
                           timestamp                      TimestampParser 
                                TRUE                                 TRUE 
                            TimeUnit                             to_arrow 
                                TRUE                                 TRUE 
                           to_duckdb                                 type 
                                TRUE                                 TRUE 
                                Type                               uint16 
                                TRUE                                 TRUE 
                              uint32                               uint64 
                                TRUE                                 TRUE 
                               uint8                        unify_schemas 
                                TRUE                                 TRUE 
                        UnionDataset            unregister_extension_type 
                                TRUE                                 TRUE 
                                utf8                         value_counts 
                                TRUE                                 TRUE 
               vctrs_extension_array                 vctrs_extension_type 
                                TRUE                                 TRUE 
                     write_csv_arrow                    write_csv_dataset 
                                TRUE                                 TRUE 
                       write_dataset                  write_delim_dataset 
                                TRUE                                 TRUE 
                       write_feather                       write_ipc_file 
                                TRUE                                 TRUE 
                    write_ipc_stream                        write_parquet 
                                TRUE                                 TRUE 
                        write_to_raw                    write_tsv_dataset 
                                TRUE                                 TRUE 

Examples

There are 97 help pages with examples, from 131 (74.05 %).

NEWS

The package has NEWS file and it is current.

License

The package uses .

Installation environment

System Info

Field Value
Image rhub/ref-image
OS Ubuntu 24.04.1 LTS
Platform x86_64-pc-linux-gnu
System x86_64, linux-gnu
Execution Time 2025-02-14 07:25:10 UTC

System information. Table about the system used to check the package.

R Session Info

Information about the R environment and capabilities:

R version 4.4.2 (2024-10-31)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 24.04.1 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.26.so;  LAPACK version 3.12.0

locale:
 [1] LC_CTYPE=C.UTF-8       LC_NUMERIC=C           LC_TIME=C.UTF-8       
 [4] LC_COLLATE=C.UTF-8     LC_MONETARY=C.UTF-8    LC_MESSAGES=C.UTF-8   
 [7] LC_PAPER=C.UTF-8       LC_NAME=C              LC_ADDRESS=C          
[10] LC_TELEPHONE=C         LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C   

time zone: UTC
tzcode source: system (glibc)

attached base packages:
[1] tools     stats     graphics  grDevices utils     datasets  methods  
[8] base     

loaded via a namespace (and not attached):
 [1] riskreports_0.0.0.9003 compiler_4.4.2         fastmap_1.2.0         
 [4] cli_3.6.4              htmltools_0.5.8.1      yaml_2.3.10           
 [7] rmarkdown_2.29         knitr_1.49             jsonlite_1.8.9        
[10] xfun_0.50              digest_0.6.37          rlang_1.1.5           
[13] evaluate_1.0.3        

Platform used:

   OS.type   file.sep dynlib.ext        GUI     endian    pkgType   path.sep 
    "unix"        "/"      ".so"      "X11"   "little"   "source"        ":" 
    r_arch 
        "" 

R’s capabilities:

       jpeg         png        tiff       tcltk         X11        aqua 
       TRUE        TRUE        TRUE        TRUE       FALSE       FALSE 
   http/ftp     sockets      libxml        fifo      cledit       iconv 
       TRUE        TRUE       FALSE        TRUE       FALSE        TRUE 
        NLS       Rprof     profmem       cairo         ICU long.double 
       TRUE        TRUE        TRUE        TRUE        TRUE        TRUE 
    libcurl 
       TRUE 

External software:

                                                     zlib 
                                                    "1.3" 
                                                    bzlib 
                                     "1.0.8, 13-Jul-2019" 
                                                       xz 
                                                  "5.4.5" 
                                               libdeflate 
                                                   "1.19" 
                                                     PCRE 
                                       "10.42 2022-12-11" 
                                                      ICU 
                                                   "74.2" 
                                                      TRE 
                                "TRE 0.8.0 R_fixes (BSD)" 
                                                    iconv 
                                             "glibc 2.39" 
                                                 readline 
                                                    "8.2" 
                                                     BLAS 
"/usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3" 

Graphics external software:

                   cairo                  cairoFT                    pango 
                "1.18.0"                       ""                 "1.52.1" 
                  libpng                     jpeg                  libtiff 
                "1.6.43"                    "8.0" "LIBTIFF, Version 4.5.1" 

Numerical characteristics of the machine:

               double.eps            double.neg.eps               double.xmin 
             2.220446e-16              1.110223e-16             2.225074e-308 
              double.xmax               double.base             double.digits 
            1.797693e+308              2.000000e+00              5.300000e+01 
          double.rounding              double.guard         double.ulp.digits 
             5.000000e+00              0.000000e+00             -5.200000e+01 
    double.neg.ulp.digits           double.exponent            double.min.exp 
            -5.300000e+01              1.100000e+01             -1.022000e+03 
           double.max.exp               integer.max               sizeof.long 
             1.024000e+03              2.147484e+09              8.000000e+00 
          sizeof.longlong         sizeof.longdouble            sizeof.pointer 
             8.000000e+00              1.600000e+01              8.000000e+00 
            sizeof.time_t            longdouble.eps        longdouble.neg.eps 
             8.000000e+00              1.084202e-19              5.421011e-20 
        longdouble.digits       longdouble.rounding          longdouble.guard 
             6.400000e+01              5.000000e+00              0.000000e+00 
    longdouble.ulp.digits longdouble.neg.ulp.digits       longdouble.exponent 
            -6.300000e+01             -6.400000e+01              1.500000e+01 
       longdouble.min.exp        longdouble.max.exp 
            -1.638200e+04              1.638400e+04 

Random number generation process:

[1] "Mersenne-Twister" "Inversion"        "Rejection"       

Information about the environment

Environmental and options variables affect how package checks and software in it might behave. Here is the environmental variables when running this report

_R_CHECK_SYSTEM_CLOCK_
                        FALSE
ACCEPT_EULA             Y
ACTIONS_RUNNER_ACTION_ARCHIVE_CACHE
                        /opt/actionarchivecache
AGENT_TOOLSDIRECTORY    /opt/hostedtoolcache
ANDROID_HOME            /usr/local/lib/android/sdk
ANDROID_NDK             /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_HOME        /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_LATEST_HOME
                        /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_ROOT        /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_SDK_ROOT        /usr/local/lib/android/sdk
ANT_HOME                /usr/share/ant
AZURE_EXTENSION_DIR     /opt/az/azcliextensions
BOOTSTRAP_HASKELL_NONINTERACTIVE
                        1
BUNDLE_EXT              linux-amd64.deb
CHROME_BIN              /usr/bin/google-chrome
CHROMEWEBDRIVER         /usr/local/share/chromedriver-linux64
CI                      true
CONDA                   /usr/share/miniconda
DEBIAN_FRONTEND         noninteractive
DENO_DOM_PLUGIN         /opt/quarto/bin/tools/x86_64/deno_dom/libplugin.so
DENO_NO_UPDATE_CHECK    1
DENO_TLS_CA_STORE       system,mozilla
DEPLOYMENT_BASEPATH     /opt/runner
DOTNET_MULTILEVEL_LOOKUP
                        0
DOTNET_NOLOGO           1
DOTNET_SKIP_FIRST_TIME_EXPERIENCE
                        1
EDGEWEBDRIVER           /usr/local/share/edge_driver
EDITOR                  vi
GECKOWEBDRIVER          /usr/local/share/gecko_driver
GHCUP_INSTALL_BASE_PREFIX
                        /usr/local
GITHUB_ACTION           __run
GITHUB_ACTION_REF       
GITHUB_ACTION_REPOSITORY
                        
GITHUB_ACTIONS          true
GITHUB_ACTOR            Gotfrid
GITHUB_ACTOR_ID         8464262
GITHUB_API_URL          https://api.github.com
GITHUB_BASE_REF         
GITHUB_ENV              /home/runner/work/_temp/_runner_file_commands/set_env_a74ce9d3-fe61-4935-aabd-1f14f9ce8080
GITHUB_EVENT_NAME       workflow_dispatch
GITHUB_EVENT_PATH       /home/runner/work/_temp/_github_workflow/event.json
GITHUB_GRAPHQL_URL      https://api.github.com/graphql
GITHUB_HEAD_REF         
GITHUB_JOB              main
GITHUB_OUTPUT           /home/runner/work/_temp/_runner_file_commands/set_output_a74ce9d3-fe61-4935-aabd-1f14f9ce8080
GITHUB_PATH             /home/runner/work/_temp/_runner_file_commands/add_path_a74ce9d3-fe61-4935-aabd-1f14f9ce8080
GITHUB_REF              refs/heads/main
GITHUB_REF_NAME         main
GITHUB_REF_PROTECTED    false
GITHUB_REF_TYPE         branch
GITHUB_REPOSITORY       pharmaR/pharmapkgs
GITHUB_REPOSITORY_ID    798326913
GITHUB_REPOSITORY_OWNER
                        pharmaR
GITHUB_REPOSITORY_OWNER_ID
                        42115094
GITHUB_RETENTION_DAYS   90
GITHUB_RUN_ATTEMPT      1
GITHUB_RUN_ID           13324244226
GITHUB_RUN_NUMBER       87
GITHUB_SERVER_URL       https://github.com
GITHUB_SHA              8610147c702e3ad4252323a87f6fad53534f1b0a
GITHUB_STATE            /home/runner/work/_temp/_runner_file_commands/save_state_a74ce9d3-fe61-4935-aabd-1f14f9ce8080
GITHUB_STEP_SUMMARY     /home/runner/work/_temp/_runner_file_commands/step_summary_a74ce9d3-fe61-4935-aabd-1f14f9ce8080
GITHUB_TRIGGERING_ACTOR
                        Gotfrid
GITHUB_WORKFLOW         Update package repositories
GITHUB_WORKFLOW_REF     pharmaR/pharmapkgs/.github/workflows/update-repos.yml@refs/heads/main
GITHUB_WORKFLOW_SHA     8610147c702e3ad4252323a87f6fad53534f1b0a
GITHUB_WORKSPACE        /home/runner/work/pharmapkgs/pharmapkgs
GOROOT_1_21_X64         /opt/hostedtoolcache/go/1.21.13/x64
GOROOT_1_22_X64         /opt/hostedtoolcache/go/1.22.12/x64
GOROOT_1_23_X64         /opt/hostedtoolcache/go/1.23.6/x64
GRADLE_HOME             /usr/share/gradle-8.12.1
HOME                    /home/runner
HOMEBREW_CLEANUP_PERIODIC_FULL_DAYS
                        3650
HOMEBREW_NO_AUTO_UPDATE
                        1
ImageOS                 ubuntu24
ImageVersion            20250209.1.0
INVOCATION_ID           61e3901631f74f2a9dcc6462ffec2653
JAVA_HOME               /usr/lib/jvm/temurin-17-jdk-amd64
JAVA_HOME_11_X64        /usr/lib/jvm/temurin-11-jdk-amd64
JAVA_HOME_17_X64        /usr/lib/jvm/temurin-17-jdk-amd64
JAVA_HOME_21_X64        /usr/lib/jvm/temurin-21-jdk-amd64
JAVA_HOME_8_X64         /usr/lib/jvm/temurin-8-jdk-amd64
JOURNAL_STREAM          8:6015
LANG                    C.UTF-8
LD_LIBRARY_PATH         /opt/R/4.4.2/lib/R/lib:/usr/local/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/temurin-17-jdk-amd64/lib/server:/opt/R/4.4.2/lib/R/lib:/usr/local/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/temurin-17-jdk-amd64/lib/server
LN_S                    ln -s
LOGGER_LOG_LEVEL        DEBUG
MAKE                    make
MEMORY_PRESSURE_WATCH   /sys/fs/cgroup/system.slice/runner-provisioner.service/memory.pressure
MEMORY_PRESSURE_WRITE   c29tZSAyMDAwMDAgMjAwMDAwMAA=
NOT_CRAN                true
NVM_DIR                 /home/runner/.nvm
PAGER                   /usr/bin/pager
PATH                    /snap/bin:/home/runner/.local/bin:/opt/pipx_bin:/home/runner/.cargo/bin:/home/runner/.config/composer/vendor/bin:/usr/local/.ghcup/bin:/home/runner/.dotnet/tools:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
PERFLOG_LOCATION_SETTING
                        RUNNER_PERFLOG
PHARMAPKGS_EXCLUDED_METRICS
                        assess_covr_coverage,assess_r_cmd_check
PHARMAPKGS_LIMIT        500
PHARMAPKGS_PLATFORM     ubuntu-22.04
PHARMAPKGS_R_VERSION    4.4
PHARMAPKGS_REMOTE_REPO
                        https://cloud.r-project.org/
PIPX_BIN_DIR            /opt/pipx_bin
PIPX_HOME               /opt/pipx
PKGCACHE_HTTP_VERSION   2
PKGLOAD_PARENT_TEMPDIR
                        /tmp/RtmprVG7M8
POWERSHELL_DISTRIBUTION_CHANNEL
                        GitHub-Actions-ubuntu24
PROCESSX_PS1c095004ae52_1739517907
                        YES
PWD                     /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_BIN_PATH         /opt/quarto/bin
QUARTO_DENO             /opt/quarto/bin/tools/x86_64/deno
QUARTO_DOCUMENT_PATH    /home/runner/work/pharmapkgs/pharmapkgs/inst/report
QUARTO_PROFILE          
QUARTO_PROJECT_DIR      /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_PROJECT_ROOT     /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_ROOT             /
QUARTO_SHARE_PATH       /opt/quarto/share
R_ARCH                  
R_BROWSER               xdg-open
R_BZIPCMD               /usr/bin/bzip2
R_DOC_DIR               /opt/R/4.4.2/lib/R/doc
R_GZIPCMD               /usr/bin/gzip
R_HOME                  /opt/R/4.4.2/lib/R
R_INCLUDE_DIR           /opt/R/4.4.2/lib/R/include
R_LIB_FOR_PAK           /opt/R/4.4.2/lib/R/site-library
R_LIBS_SITE             /opt/R/4.4.2/lib/R/site-library
R_LIBS_USER             /home/runner/work/_temp/Library
R_PAPERSIZE             letter
R_PAPERSIZE_USER        letter
R_PDFVIEWER             /usr/bin/xdg-open
R_PLATFORM              x86_64-pc-linux-gnu
R_PRINTCMD              /usr/bin/lpr
R_RD4PDF                times,inconsolata,hyper
R_SESSION_TMPDIR        /tmp/RtmpuD8Qky
R_SHARE_DIR             /opt/R/4.4.2/lib/R/share
R_STRIP_SHARED_LIB      strip --strip-unneeded
R_STRIP_STATIC_LIB      strip --strip-debug
R_TEXI2DVICMD           /usr/bin/texi2dvi
R_UNZIPCMD              /usr/bin/unzip
R_ZIPCMD                /usr/bin/zip
RUNNER_ARCH             X64
RUNNER_ENVIRONMENT      github-hosted
RUNNER_NAME             GitHub Actions 9
RUNNER_OS               Linux
RUNNER_PERFLOG          /home/runner/perflog
RUNNER_TEMP             /home/runner/work/_temp
RUNNER_TOOL_CACHE       /opt/hostedtoolcache
RUNNER_TRACKING_ID      github_3e9f06ba-b0d2-4deb-8e9e-712a463f59f3
RUNNER_USER             runner
RUNNER_WORKSPACE        /home/runner/work/pharmapkgs
SED                     /usr/bin/sed
SELENIUM_JAR_PATH       /usr/share/java/selenium-server.jar
SGX_AESM_ADDR           1
SHLVL                   1
STATS_D                 true
STATS_D_D               true
STATS_D_TC              true
STATS_EXT               true
STATS_EXTP              https://provjobdprod.z13.web.core.windows.net/settings/provjobdsettings-latest/provjobd.data
STATS_PIP               false
STATS_RDCL              true
STATS_TRP               true
STATS_UE                true
STATS_V3PS              true
STATS_VMD               true
STATS_VMFE              true
SWIFT_PATH              /usr/share/swift/usr/bin
SYSTEMD_EXEC_PID        835
TAR                     /usr/bin/tar
TZ                      UTC
USER                    runner
VCPKG_INSTALLATION_ROOT
                        /usr/local/share/vcpkg
XDG_CONFIG_HOME         /home/runner/.config
XDG_RUNTIME_DIR         /run/user/1001

These are the options set to generate the report:

$add.smooth
[1] TRUE

$bitmapType
[1] "cairo"

$browser
[1] "xdg-open"

$browserNLdisabled
[1] FALSE

$callr.condition_handler_cli_message
function (msg) 
{
    custom_handler <- getOption("cli.default_handler")
    if (is.function(custom_handler)) {
        custom_handler(msg)
    }
    else {
        cli_server_default(msg)
    }
}
<bytecode: 0x55864b053910>
<environment: namespace:cli>

$catch.script.errors
[1] FALSE

$CBoundsCheck
[1] FALSE

$check.bounds
[1] FALSE

$citation.bibtex.max
[1] 1

$continue
[1] "+ "

$contrasts
        unordered           ordered 
"contr.treatment"      "contr.poly" 

$covr.record_tests
[1] TRUE

$defaultPackages
[1] "datasets"  "utils"     "grDevices" "graphics"  "stats"     "methods"  

$demo.ask
[1] "default"

$deparse.cutoff
[1] 60

$device
function (width = 7, height = 7, ...) 
{
    grDevices::pdf(NULL, width, height, ...)
}
<bytecode: 0x55864c18bea0>
<environment: namespace:knitr>

$device.ask.default
[1] FALSE

$digits
[1] 7

$dvipscmd
[1] "dvips"

$echo
[1] FALSE

$editor
[1] "vi"

$encoding
[1] "native.enc"

$example.ask
[1] "default"

$expressions
[1] 5000

$help.search.types
[1] "vignette" "demo"     "help"    

$help.try.all.packages
[1] FALSE

$htmltools.preserve.raw
[1] TRUE

$HTTPUserAgent
[1] "R/4.4.2 R (4.4.2 x86_64-pc-linux-gnu x86_64 linux-gnu) on GitHub Actions"

$internet.info
[1] 2

$keep.parse.data
[1] TRUE

$keep.parse.data.pkgs
[1] FALSE

$keep.source
[1] FALSE

$keep.source.pkgs
[1] FALSE

$knitr.in.progress
[1] TRUE

$locatorBell
[1] TRUE

$mailer
[1] "mailto"

$matprod
[1] "default"

$max.contour.segments
[1] 25000

$max.print
[1] 99999

$menu.graphics
[1] TRUE

$na.action
[1] "na.omit"

$Ncpus
[1] 1

$nwarnings
[1] 50

$OutDec
[1] "."

$pager
[1] "/opt/R/4.4.2/lib/R/bin/pager"

$papersize
[1] "letter"

$PCRE_limit_recursion
[1] NA

$PCRE_study
[1] FALSE

$PCRE_use_JIT
[1] TRUE

$pdfviewer
[1] "/usr/bin/xdg-open"

$pkgType
[1] "source"

$printcmd
[1] "/usr/bin/lpr"

$prompt
[1] "> "

$repos
                      CRAN 
"https://cran.rstudio.com" 

$rl_word_breaks
[1] " \t\n\"\\'`><=%;,|&{()}"

$rlang_trace_top_env
<environment: R_GlobalEnv>

$scipen
[1] 0

$show.coef.Pvalues
[1] TRUE

$show.error.messages
[1] TRUE

$show.signif.stars
[1] TRUE

$showErrorCalls
[1] TRUE

$showNCalls
[1] 50

$showWarnCalls
[1] FALSE

$str
$str$strict.width
[1] "no"

$str$digits.d
[1] 3

$str$vec.len
[1] 4

$str$list.len
[1] 99

$str$deparse.lines
NULL

$str$drop.deparse.attr
[1] TRUE

$str$formatNum
function (x, ...) 
format(x, trim = TRUE, drop0trailing = TRUE, ...)
<environment: 0x55864a52b520>


$str.dendrogram.last
[1] "`"

$texi2dvi
[1] "/usr/bin/texi2dvi"

$tikzMetricsDictionary
[1] "validation_report_arrow_v18.1.0.1-tikzDictionary"

$timeout
[1] 60

$try.outFile
A connection with                    
description ""      
class       "file"  
mode        "w+b"   
text        "binary"
opened      "opened"
can read    "yes"   
can write   "yes"   

$ts.eps
[1] 1e-05

$ts.S.compat
[1] FALSE

$unzip
[1] "/usr/bin/unzip"

$useFancyQuotes
[1] FALSE

$verbose
[1] FALSE

$warn
[1] 0

$warning.length
[1] 1000

$warnPartialMatchArgs
[1] FALSE

$warnPartialMatchAttr
[1] FALSE

$warnPartialMatchDollar
[1] FALSE

$width
[1] 80