Validation Report - apollo@0.3.4
Context
This report is fully automated and builds on rhub/ref-image image. Documents the installation of this package on an open source R environment, focusing on:
- Installation environment description
- Testing coverage
It is limited to assess whether unit tests and documentation are present and can execute without error. An assessment would be required that the tests and documentation are meaningful.
Package apollo
Metric based risk assessment
The following metrics are derived from the riskmetric R package.
| has_news | 0 |
| exported_namespace | 94 |
| has_vignettes | 2 |
| export_help | 94 |
| has_website | TRUE |
| has_maintainer | Stephane Hess S.Hess@leeds.ac.uk |
| bugs_status | scraping bug reports fromm BugReports host ‘apollochoicemodelling’ not implemented |
| size_codebase | 15894 |
| has_bug_reports_url | 1 |
| downloads_1yr | 28107 |
| reverse_dependencies | 2 |
| has_examples | 1 |
| dependencies | 22 |
| license | GPL-2 |
Package general assessment: Coverage, check results, size, download the last year, reverse dependencies and number of dependencies.
Dependencies
Overall the package has these dependencies:
| package | type | |
|---|---|---|
| 1 | stats | Depends |
| 2 | utils | Depends |
| 3 | Rcpp (>= 1.0.0) | Imports |
| 4 | maxLik | Imports |
| 5 | mnormt | Imports |
| 6 | mvtnorm | Imports |
| 7 | graphics | Imports |
| 8 | randtoolbox | Imports |
| 9 | numDeriv | Imports |
| 10 | parallel | Imports |
| 11 | Deriv | Imports |
| 12 | matrixStats | Imports |
| 13 | RSGHB | Imports |
| 14 | coda | Imports |
| 15 | tibble | Imports |
| 16 | stringr | Imports |
| 17 | bgw (>= 0.1.3) | Imports |
| 18 | cli | Imports |
| 19 | Rsolnp | Imports |
| 20 | Rcpp | LinkingTo |
| 21 | RcppArmadillo | LinkingTo |
| 22 | RcppEigen | LinkingTo |
Package dependencies
Reverse dependencies
Overall the package has 2 reverse dependencies:
logitr, support.BWS
Namespace
Overall the package has 94 exported objects. 94 are documented:
apollo_addCovariance apollo_attach
TRUE TRUE
apollo_avgInterDraws apollo_avgIntraDraws
TRUE TRUE
apollo_basTest apollo_bootstrap
TRUE TRUE
apollo_checkArguments apollo_choiceAnalysis
TRUE TRUE
apollo_classAlloc apollo_cnl
TRUE TRUE
apollo_combineModels apollo_combineResults
TRUE TRUE
apollo_compareInputs apollo_conditionals
TRUE TRUE
apollo_deltaMethod apollo_detach
TRUE TRUE
apollo_dft apollo_diagnostics
TRUE TRUE
apollo_dVdB apollo_dVdBOld
TRUE TRUE
apollo_el apollo_emdc
TRUE TRUE
apollo_emdc1 apollo_emdc2
TRUE TRUE
apollo_estimate apollo_estimateHB
TRUE TRUE
apollo_expandLoop apollo_firstRow
TRUE TRUE
apollo_fitsTest apollo_fmnl
TRUE TRUE
apollo_fnl apollo_initialise
TRUE TRUE
apollo_insertComponentName apollo_insertFunc
TRUE TRUE
apollo_insertOLList apollo_insertRows
TRUE TRUE
apollo_insertRRMQuotes apollo_insertScaling
TRUE TRUE
apollo_keepRows apollo_lc
TRUE TRUE
apollo_lcConditionals apollo_lcEM
TRUE TRUE
apollo_lcUnconditionals apollo_llCalc
TRUE TRUE
apollo_loadModel apollo_longToWide
TRUE TRUE
apollo_lrTest apollo_makeCluster
TRUE TRUE
apollo_makeDraws apollo_makeGrad
TRUE TRUE
apollo_makeHessian apollo_makeLogLike
TRUE TRUE
apollo_mdcev apollo_mdcev2
TRUE TRUE
apollo_mdcnev apollo_mixConditionals
TRUE TRUE
apollo_mixEM apollo_mixUnconditionals
TRUE TRUE
apollo_mlhs apollo_mnl
TRUE TRUE
apollo_modelOutput apollo_modifyUserDefFunc
TRUE TRUE
apollo_nl apollo_normalDensity
TRUE TRUE
apollo_ol apollo_op
TRUE TRUE
apollo_outOfSample apollo_ownModel
TRUE TRUE
apollo_panelProd apollo_prediction
TRUE TRUE
apollo_prepareProb apollo_preprocess
TRUE TRUE
apollo_print apollo_readBeta
TRUE TRUE
apollo_rrm apollo_saveOutput
TRUE TRUE
apollo_searchStart apollo_setRows
TRUE TRUE
apollo_sharesTest apollo_sink
TRUE TRUE
apollo_speedTest apollo_tobit
TRUE TRUE
apollo_unconditionals apollo_validate
TRUE TRUE
apollo_validateControl apollo_validateData
TRUE TRUE
apollo_validateHBControl apollo_validateInputs
TRUE TRUE
apollo_varcov apollo_varList
TRUE TRUE
apollo_weighting apollo_writeF12
TRUE TRUE
apollo_writeTheta aux_validateRows
TRUE TRUE Examples
There are 101 help pages with examples, from 101 (100.00 %).
NEWS
The package has NEWS file and it is current.
License
The package uses .
Installation environment
System Info
| Field | Value |
|---|---|
| Image | rhub/ref-image |
| OS | Ubuntu 24.04.1 LTS |
| Platform | x86_64-pc-linux-gnu |
| System | x86_64, linux-gnu |
| Execution Time | 2025-02-14 07:18:38 UTC |
System information. Table about the system used to check the package.
R Session Info
Information about the R environment and capabilities:
R version 4.4.2 (2024-10-31)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 24.04.1 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.26.so; LAPACK version 3.12.0
locale:
[1] LC_CTYPE=C.UTF-8 LC_NUMERIC=C LC_TIME=C.UTF-8
[4] LC_COLLATE=C.UTF-8 LC_MONETARY=C.UTF-8 LC_MESSAGES=C.UTF-8
[7] LC_PAPER=C.UTF-8 LC_NAME=C LC_ADDRESS=C
[10] LC_TELEPHONE=C LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C
time zone: UTC
tzcode source: system (glibc)
attached base packages:
[1] tools stats graphics grDevices utils datasets methods
[8] base
loaded via a namespace (and not attached):
[1] riskreports_0.0.0.9003 compiler_4.4.2 fastmap_1.2.0
[4] cli_3.6.4 htmltools_0.5.8.1 yaml_2.3.10
[7] rmarkdown_2.29 knitr_1.49 jsonlite_1.8.9
[10] xfun_0.50 digest_0.6.37 rlang_1.1.5
[13] evaluate_1.0.3 Platform used:
OS.type file.sep dynlib.ext GUI endian pkgType path.sep
"unix" "/" ".so" "X11" "little" "source" ":"
r_arch
"" R’s capabilities:
jpeg png tiff tcltk X11 aqua
TRUE TRUE TRUE TRUE FALSE FALSE
http/ftp sockets libxml fifo cledit iconv
TRUE TRUE FALSE TRUE FALSE TRUE
NLS Rprof profmem cairo ICU long.double
TRUE TRUE TRUE TRUE TRUE TRUE
libcurl
TRUE External software:
zlib
"1.3"
bzlib
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xz
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libdeflate
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PCRE
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ICU
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TRE
"TRE 0.8.0 R_fixes (BSD)"
iconv
"glibc 2.39"
readline
"8.2"
BLAS
"/usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3" Graphics external software:
cairo cairoFT pango
"1.18.0" "" "1.52.1"
libpng jpeg libtiff
"1.6.43" "8.0" "LIBTIFF, Version 4.5.1" Numerical characteristics of the machine:
double.eps double.neg.eps double.xmin
2.220446e-16 1.110223e-16 2.225074e-308
double.xmax double.base double.digits
1.797693e+308 2.000000e+00 5.300000e+01
double.rounding double.guard double.ulp.digits
5.000000e+00 0.000000e+00 -5.200000e+01
double.neg.ulp.digits double.exponent double.min.exp
-5.300000e+01 1.100000e+01 -1.022000e+03
double.max.exp integer.max sizeof.long
1.024000e+03 2.147484e+09 8.000000e+00
sizeof.longlong sizeof.longdouble sizeof.pointer
8.000000e+00 1.600000e+01 8.000000e+00
sizeof.time_t longdouble.eps longdouble.neg.eps
8.000000e+00 1.084202e-19 5.421011e-20
longdouble.digits longdouble.rounding longdouble.guard
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longdouble.ulp.digits longdouble.neg.ulp.digits longdouble.exponent
-6.300000e+01 -6.400000e+01 1.500000e+01
longdouble.min.exp longdouble.max.exp
-1.638200e+04 1.638400e+04 Random number generation process:
[1] "Mersenne-Twister" "Inversion" "Rejection" Information about the environment
Environmental and options variables affect how package checks and software in it might behave. Here is the environmental variables when running this report
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