Validation Report - DoE.base@1.2.4
Context
This report is fully automated and builds on rhub/ref-image image. Documents the installation of this package on an open source R environment, focusing on:
- Installation environment description
- Testing coverage
It is limited to assess whether unit tests and documentation are present and can execute without error. An assessment would be required that the tests and documentation are meaningful.
Package DoE.base
Metric based risk assessment
The following metrics are derived from the riskmetric R package.
| has_news | 0 |
| exported_namespace | 493 |
| has_vignettes | 0 |
| export_help | 493 |
| has_website | TRUE |
| has_maintainer | Ulrike Groemping ulrike.groemping@bht-berlin.de |
| bugs_status | package DESCRIPTION does not have a BugReports field |
| has_bug_reports_url | 0 |
| downloads_1yr | 73041 |
| reverse_dependencies | 20 |
| has_examples | 1 |
| dependencies | 12 |
| license | GPL (>= 2) |
Package general assessment: Coverage, check results, size, download the last year, reverse dependencies and number of dependencies.
Dependencies
Overall the package has these dependencies:
| package | type | |
|---|---|---|
| 1 | grid | Depends |
| 2 | conf.design | Depends |
| 3 | stats | Imports |
| 4 | utils | Imports |
| 5 | graphics | Imports |
| 6 | grDevices | Imports |
| 7 | vcd | Imports |
| 8 | combinat | Imports |
| 9 | MASS | Imports |
| 10 | lattice | Imports |
| 11 | numbers | Imports |
| 12 | partitions | Imports |
Package dependencies
Reverse dependencies
Overall the package has 20 reverse dependencies:
atmopt, cbcTools, DoE.MIParray, DoE.wrapper, ExpertChoice, FrF2, ggDoE, industRial, lhs, pid, RcmdrPlugin.BWS2, RcmdrPlugin.DoE, rsm, sFFLHD, simrel, SOAs, support.BWS, support.BWS2, support.BWS3, support.CEs
Namespace
Overall the package has 493 exported objects. 464 are documented:
add.response aov
TRUE TRUE
aov.default aov.design
TRUE TRUE
block.catlg3 change.contr
TRUE TRUE
CME.EM08 CME.LW98
TRUE TRUE
col.remove contr.FrF2
TRUE TRUE
contr.XuWu contr.XuWuPoly
TRUE TRUE
corrPlot cross.design
TRUE TRUE
data2design des.recode
TRUE TRUE
design.info design.info<-
TRUE TRUE
desnum desnum<-
TRUE TRUE
expansive.replace export.design
TRUE TRUE
fac.design factor.names
TRUE TRUE
factor.names<- generators
TRUE TRUE
getblock GR
TRUE TRUE
GRind GWLP
TRUE TRUE
halfnormal ICFT
TRUE TRUE
ICFTs iscube
TRUE TRUE
isstar L100.2.16.5.3.10.3
TRUE TRUE
L100.2.18.5.9.10.1 L100.2.2.50.1
TRUE TRUE
L100.2.22.25.1 L100.2.29.5.5
TRUE TRUE
L100.2.34.5.3.10.1 L100.2.4.10.4
TRUE TRUE
L100.2.40.5.4 L100.2.5.5.4.10.3
TRUE TRUE
L100.2.51.5.3 L100.2.7.5.10.10.1
TRUE TRUE
L100.2.99 L100.5.20.20.1
TRUE TRUE
L100.5.8.10.3 L1024.4.11
TRUE FALSE
L1024.4.41 L1024.4.6
FALSE FALSE
L104.2.100.4.1 L104.2.51.4.1.26.1
TRUE TRUE
L104.2.52.52.1 L104.2.65.4.1.13.1
TRUE TRUE
L108.2.1.3.33.6.2.18.1 L108.2.1.3.35.6.3.9.1
TRUE TRUE
L108.2.10.3.31.6.1.18.1 L108.2.10.3.33.6.2.9.1
TRUE TRUE
L108.2.10.3.40.6.1.9.1 L108.2.107
TRUE TRUE
L108.2.12.3.29.6.3 L108.2.13.3.30.6.1.18.1
TRUE TRUE
L108.2.13.6.3 L108.2.15.6.1.18.1
TRUE TRUE
L108.2.17.3.29.6.2 L108.2.18.3.31.18.1
TRUE TRUE
L108.2.18.3.33.6.1.9.1 L108.2.2.3.35.6.1.18.1
TRUE TRUE
L108.2.2.3.37.6.2.9.1 L108.2.2.3.42.18.1
TRUE TRUE
L108.2.2.54.1 L108.2.20.3.34.9.1
TRUE TRUE
L108.2.21.3.1.6.2 L108.2.22.27.1
TRUE TRUE
L108.2.27.3.33.9.1 L108.2.3.3.16.6.8
TRUE TRUE
L108.2.3.3.32.6.2.18.1 L108.2.3.3.34.6.3.9.1
TRUE TRUE
L108.2.3.3.39.18.1 L108.2.3.3.41.6.1.9.1
TRUE TRUE
L108.2.34.3.29.6.1 L108.2.4.3.31.6.2.18.1
TRUE TRUE
L108.2.4.3.33.6.3.9.1 L108.2.40.6.1
TRUE TRUE
L108.2.8.3.30.6.2.18.1 L108.2.9.3.34.6.1.18.1
TRUE TRUE
L108.2.9.3.36.6.2.9.1 L108.3.36.36.1
TRUE TRUE
L108.3.37.6.2.18.1 L108.3.39.6.3.9.1
TRUE TRUE
L108.3.4.6.11 L108.3.44.9.1.12.1
TRUE TRUE
L112.2.104.8.1 L112.2.56.56.1
TRUE TRUE
L112.2.75.4.3.28.1 L112.2.79.8.1.14.1
TRUE TRUE
L112.2.89.7.1.8.1 L112.4.12.28.1
TRUE TRUE
L116.2.115 L116.2.2.58.1
TRUE TRUE
L116.2.23.29.1 L117.3.13.39.1
TRUE TRUE
L12.2.11 L12.2.2.6.1
TRUE TRUE
L12.2.4.3.1 L120.2.116.4.1
TRUE TRUE
L120.2.28.10.1.12.1 L120.2.30.6.1.20.1
TRUE TRUE
L120.2.59.4.1.30.1 L120.2.60.60.1
TRUE TRUE
L120.2.68.4.1.6.1.10.1 L120.2.70.3.1.4.1.10.1
TRUE TRUE
L120.2.70.4.1.5.1.6.1 L120.2.74.4.1.15.1
TRUE TRUE
L120.2.75.4.1.10.1 L120.2.75.4.1.6.1
TRUE TRUE
L120.2.79.4.1.5.1 L120.2.87.3.1.4.1
TRUE TRUE
L121.11.12 L124.2.123
TRUE TRUE
L124.2.2.62.1 L124.2.22.31.1
TRUE TRUE
L125.5.25.25.1 L125.5.6
TRUE FALSE
L126.3.20.6.1.21.1 L126.3.21.42.1
TRUE TRUE
L126.3.23.6.1.7.1 L126.3.24.14.1
TRUE TRUE
L128.2.15.8.1 L128.2.20.4.3
TRUE TRUE
L128.2.28.4.2 L128.2.3.4.11.8.13
TRUE TRUE
L128.2.3.4.18.8.10 L128.2.3.4.25.8.7
TRUE TRUE
L128.2.4.4.15.8.9.16.1 L128.2.4.4.22.8.6.16.1
TRUE TRUE
L128.2.4.4.29.8.3.16.1 L128.2.4.4.36.16.1
TRUE TRUE
L128.2.4.4.8.8.12.16.1 L128.2.5.4.10.8.11.16.1
TRUE TRUE
L128.2.5.4.17.8.8.16.1 L128.2.5.4.24.8.5.16.1
TRUE TRUE
L128.2.5.4.31.8.2.16.1 L128.2.5.4.8.8.14
TRUE TRUE
L128.2.6.4.12.8.10.16.1 L128.2.6.4.19.8.7.16.1
TRUE TRUE
L128.2.6.4.2 L128.2.6.4.26.8.4.16.1
TRUE TRUE
L128.2.6.4.33.8.1.16.1 L128.2.6.4.5.8.13.16.1
TRUE TRUE
L128.2.64.64.1 L128.2.8.8.2
TRUE TRUE
L128.4.32.32.1 L128.8.16.16.1
TRUE TRUE
L132.2.131 L132.2.15.6.1.22.1
TRUE TRUE
L132.2.18.3.1.22.1 L132.2.18.6.1.11.1
TRUE TRUE
L132.2.2.66.1 L132.2.22.33.1
TRUE TRUE
L132.2.27.11.1 L132.2.42.6.1
TRUE TRUE
L135.3.27.45.1 L135.3.32.9.1.15.1
TRUE TRUE
L136.2.132.4.1 L136.2.67.4.1.34.1
TRUE TRUE
L136.2.68.68.1 L136.2.83.4.1.17.1
TRUE TRUE
L140.2.139 L140.2.17.10.1.14.1
TRUE TRUE
L140.2.2.70.1 L140.2.21.7.1.10.1
TRUE TRUE
L140.2.22.35.1 L140.2.25.5.1.14.1
TRUE TRUE
L140.2.27.5.1.7.1 L140.2.34.14.1
TRUE TRUE
L140.2.36.10.1 L140.2.38.7.1
TRUE TRUE
L144.12.7 L144.2.1.3.2.4.2
TRUE TRUE
L144.2.103.8.1.18.1 L144.2.111.6.1.24.1
TRUE TRUE
L144.2.113.3.1.24.1 L144.2.117.8.1.9.1
TRUE TRUE
L144.2.136.8.1 L144.2.16.3.3.6.6.24.1
TRUE TRUE
L144.2.2.3.2.4.2 L144.2.44.3.11.12.2
TRUE TRUE
L144.2.72.72.1 L144.2.74.3.4.6.6.8.1
TRUE TRUE
L144.2.75.3.3.4.1.6.6.12.1 L144.2.76.3.12.6.4.8.1
TRUE TRUE
L144.2.76.3.7.4.1.6.5.12.1 L144.3.48.48.1
TRUE TRUE
L144.4.11.12.2 L144.4.36.36.1
TRUE TRUE
L16.2.8.8.1 L16.4.5
TRUE TRUE
L18 L18.3.6.6.1
TRUE TRUE
L192.2.1.3.1.4.3 L192.2.2.4.2.6.1
FALSE FALSE
L192.2.3.3.1.4.2 L192.2.36.4.3
FALSE TRUE
L20.2.19 L20.2.2.10.1
TRUE TRUE
L20.2.8.5.1 L2048.2.63
TRUE TRUE
L216.2.1.3.2.4.1.6.1 L2187.3.112
TRUE TRUE
L2187.3.14 L2187.3.27
TRUE TRUE
L24.2.11.4.1.6.1 L24.2.12.12.1
TRUE TRUE
L24.2.13.3.1.4.1 L24.2.20.4.1
TRUE TRUE
L2401.7.8 L243.3.11
FALSE FALSE
L243.3.121 L243.3.20
TRUE TRUE
L243.3.6 L25.5.6
FALSE TRUE
L256.2.19 L256.2.19
TRUE TRUE
L256.2.24.8.2 L256.2.52.4.3
TRUE TRUE
L256.4.17 L256.4.5
TRUE TRUE
L256.4.85 L27.3.4
TRUE FALSE
L27.3.9.9.1 L28.2.12.7.1
TRUE TRUE
L28.2.2.14.1 L28.2.27
TRUE TRUE
L288.3.2.4.2.6.1 L32.2.16
TRUE TRUE
L32.2.16.16.1 L32.2.4.4.2
TRUE TRUE
L32.2.9 L32.4.8.8.1
TRUE TRUE
L343.7.8 L36
FALSE TRUE
L36.2.1.3.3.6.3 L36.2.10.3.1.6.2
TRUE TRUE
L36.2.10.3.8.6.1 L36.2.13.3.2.6.1
TRUE TRUE
L36.2.13.6.2 L36.2.16.9.1
TRUE TRUE
L36.2.18.3.1.6.1 L36.2.2.18.1
TRUE TRUE
L36.2.2.3.5.6.2 L36.2.20.3.2
TRUE TRUE
L36.2.27.3.1 L36.2.3.3.2.6.3
TRUE TRUE
L36.2.3.3.9.6.1 L36.2.35
TRUE TRUE
L36.2.4.3.1.6.3 L36.2.8.6.3
TRUE TRUE
L36.2.9.3.4.6.2 L36.3.12.12.1
TRUE TRUE
L36.3.7.6.3 L384.2.4.3.1.4.2
TRUE FALSE
L384.2.40.8.2 L4.2.3
TRUE TRUE
L40.2.19.4.1.10.1 L40.2.20.20.1
TRUE TRUE
L40.2.25.4.1.5.1 L40.2.36.4.1
TRUE TRUE
L40.2.6.5.1 L4096.4.12
TRUE TRUE
L4096.4.126 L4096.4.21
FALSE FALSE
L4096.8.9 L432.2.1.3.3.4.2
FALSE TRUE
L44.2.15.11.1 L44.2.2.22.1
TRUE TRUE
L44.2.43 L45.3.9.15.1
TRUE TRUE
L48.2.24.24.1 L48.2.3.3.1.4.1
TRUE FALSE
L48.2.31.6.1.8.1 L48.2.33.3.1.8.1
TRUE TRUE
L48.2.4.3.1.4.1 L48.2.40.8.1
TRUE TRUE
L48.2.7.6.1 L48.2.9.3.1
TRUE TRUE
L48.4.12.12.1 L49.7.8
TRUE TRUE
L50.5.10.10.1 L512.2.56.8.2
TRUE TRUE
L512.8.9 L52.2.16.13.1
FALSE TRUE
L52.2.2.26.1 L52.2.51
TRUE TRUE
L54 L54.2.1.3.5
TRUE TRUE
L54.3.18.18.1 L54.3.20.6.1.9.1
TRUE TRUE
L56.2.27.4.1.14.1 L56.2.28.28.1
TRUE TRUE
L56.2.37.4.1.7.1 L56.2.52.4.1
TRUE TRUE
L576.2.2.3.1.4.2.6.1 L576.3.1.4.3.6.1
FALSE TRUE
L60.2.15.6.1.10.1 L60.2.17.15.1
TRUE TRUE
L60.2.2.30.1 L60.2.21.10.1
TRUE TRUE
L60.2.23.5.1 L60.2.24.6.1
TRUE TRUE
L60.2.30.3.1 L60.2.59
TRUE TRUE
L625.5.6 L63.3.12.21.1
FALSE TRUE
L64.2.12.4.2 L64.2.32.32.1
TRUE TRUE
L64.2.5.4.10.8.4 L64.2.5.4.17.8.1
TRUE TRUE
L64.2.6.4.4 L64.2.7.8.1
TRUE TRUE
L64.2.8.4.3 L64.4.14.8.3
TRUE TRUE
L64.4.16.16.1 L64.4.6
TRUE TRUE
L64.4.7.8.6 L64.8.9
TRUE TRUE
L6561.3.248 L6561.3.28
FALSE FALSE
L6561.3.41 L6561.9.10
FALSE FALSE
L68.2.18.17.1 L68.2.2.34.1
TRUE TRUE
L68.2.67 L72.2.10.3.13.4.1.6.3
TRUE TRUE
L72.2.10.3.16.6.2.12.1 L72.2.10.3.20.4.1.6.2
TRUE TRUE
L72.2.11.3.17.4.1.6.2 L72.2.11.3.20.6.1.12.1
TRUE TRUE
L72.2.12.3.2 L72.2.12.3.21.4.1.6.1
TRUE TRUE
L72.2.14.3.3.4.1.6.6 L72.2.15.3.7.4.1.6.5
TRUE TRUE
L72.2.17.3.12.4.1.6.3 L72.2.18.3.16.4.1.6.2
TRUE TRUE
L72.2.19.3.20.4.1.6.1 L72.2.27.3.11.6.1.12.1
TRUE TRUE
L72.2.27.3.6.6.4 L72.2.28.3.2.6.4
TRUE TRUE
L72.2.30.3.1.6.4 L72.2.31.6.4
TRUE TRUE
L72.2.34.3.3.4.1.6.3 L72.2.34.3.8.4.1.6.2
TRUE TRUE
L72.2.35.3.12.4.1.6.1 L72.2.35.3.5.4.1.6.2
TRUE TRUE
L72.2.35.4.1.18.1 L72.2.36.3.2.4.1.6.3
TRUE TRUE
L72.2.36.3.9.4.1.6.1 L72.2.36.36.1
TRUE TRUE
L72.2.37.3.1.4.1.6.3 L72.2.37.3.13.4.1
TRUE TRUE
L72.2.4.3.1.6.1 L72.2.41.4.1.6.3
TRUE TRUE
L72.2.42.3.4.4.1.6.2 L72.2.43.3.1.4.1.6.2
TRUE TRUE
L72.2.43.3.8.4.1.6.1 L72.2.44.3.12.4.1
TRUE TRUE
L72.2.46.3.2.4.1.6.1 L72.2.46.4.1.6.2
TRUE TRUE
L72.2.49.4.1.9.1 L72.2.5.3.3.4.1.6.7
TRUE TRUE
L72.2.51.3.1.4.1.6.1 L72.2.53.3.2.4.1
TRUE TRUE
L72.2.6.3.3.6.6.12.1 L72.2.6.3.7.4.1.6.6
TRUE TRUE
L72.2.60.3.1.4.1 L72.2.68.4.1
TRUE TRUE
L72.2.7.3.4.4.1.6.6 L72.2.7.3.7.6.5.12.1
TRUE TRUE
L72.2.8.3.12.4.1.6.4 L72.2.8.3.8.4.1.6.5
TRUE TRUE
L72.2.9.3.12.6.3.12.1 L72.2.9.3.16.4.1.6.3
TRUE TRUE
L72.3.24.24.1 L729.3.12
TRUE TRUE
L729.3.14 L729.3.56
TRUE FALSE
L729.9.10 L75.5.8.15.1
FALSE TRUE
L76.2.19.19.1 L76.2.2.38.1
TRUE TRUE
L76.2.75 L8.2.4.4.1
TRUE TRUE
L80.2.12.5.1 L80.2.40.40.1
TRUE TRUE
L80.2.51.4.3.20.1 L80.2.55.8.1.10.1
TRUE TRUE
L80.2.6.4.1.5.1 L80.2.61.5.1.8.1
TRUE TRUE
L80.2.72.8.1 L80.4.10.20.1
TRUE TRUE
L81.3.10 L81.3.27.27.1
FALSE TRUE
L81.3.5 L81.3.8
FALSE FALSE
L81.9.10 L84.2.14.6.1.14.1
TRUE TRUE
L84.2.2.42.1 L84.2.20.21.1
TRUE TRUE
L84.2.20.3.1.14.1 L84.2.22.6.1.7.1
TRUE TRUE
L84.2.27.6.1 L84.2.28.7.1
TRUE TRUE
L84.2.33.3.1 L84.2.83
TRUE TRUE
L88.2.43.4.1.22.1 L88.2.44.44.1
TRUE TRUE
L88.2.56.4.1.11.1 L88.2.84.4.1
TRUE TRUE
L9.3.4 L90.3.26.6.1.15.1
TRUE TRUE
L90.3.30.30.1 L92.2.2.46.1
TRUE TRUE
L92.2.21.23.1 L92.2.91
TRUE TRUE
L96.2.12.4.20.24.1 L96.2.17.4.23.6.1
TRUE TRUE
L96.2.18.4.22.12.1 L96.2.19.3.1.4.23
TRUE TRUE
L96.2.20.4.2 L96.2.26.4.23
TRUE TRUE
L96.2.39.3.1.4.14.8.1 L96.2.43.4.12.6.1.8.1
TRUE TRUE
L96.2.43.4.15.8.1 L96.2.44.4.11.8.1.12.1
TRUE TRUE
L96.2.48.48.1 L96.2.5.4.2.6.1
TRUE TRUE
L96.2.7.3.1 L96.2.71.6.1.16.1
TRUE TRUE
L96.2.73.3.1.16.1 L96.2.80.16.1
TRUE TRUE
L98.7.14.14.1 L99.3.13.33.1
TRUE TRUE
length2 length3
TRUE TRUE
length4 length5
TRUE TRUE
lengths Letters
TRUE TRUE
lm lm.default
TRUE TRUE
lm.design lowerbound_AR
TRUE TRUE
make.formulas make.generators
TRUE TRUE
ME.Lenth oa_feasible
TRUE TRUE
oa.design oa.max3
TRUE TRUE
oa.max4 oa.maxGR
TRUE TRUE
oa.min3 oa.min34
TRUE TRUE
oa.min4 oa.minRelProjAberr
TRUE TRUE
oacat oacat3
TRUE TRUE
ord origin
TRUE TRUE
P2.2 P3.3
TRUE TRUE
P4.4 param.design
TRUE TRUE
paramtowide pickcube
TRUE TRUE
planor2design plot.design
TRUE TRUE
qua.design redesign
TRUE TRUE
reptolong reptowide
TRUE TRUE
rerandomize.design response.names
TRUE TRUE
response.names<- run.order
TRUE TRUE
run.order<- SCFTs
TRUE TRUE
show.oas SN
TRUE TRUE
tupleSel undesign
TRUE TRUE
Yates3
TRUE Examples
There are 37 help pages with examples, from 37 (100.00 %).
NEWS
The package has NEWS file and it is current.
License
The package uses .
Installation environment
System Info
| Field | Value |
|---|---|
| Image | rhub/ref-image |
| OS | Ubuntu 24.04.1 LTS |
| Platform | x86_64-pc-linux-gnu |
| System | x86_64, linux-gnu |
| Execution Time | 2025-02-25 03:22:48 UTC |
System information. Table about the system used to check the package.
R Session Info
Information about the R environment and capabilities:
R version 4.4.2 (2024-10-31)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 24.04.1 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.26.so; LAPACK version 3.12.0
locale:
[1] LC_CTYPE=C.UTF-8 LC_NUMERIC=C LC_TIME=C.UTF-8
[4] LC_COLLATE=C.UTF-8 LC_MONETARY=C.UTF-8 LC_MESSAGES=C.UTF-8
[7] LC_PAPER=C.UTF-8 LC_NAME=C LC_ADDRESS=C
[10] LC_TELEPHONE=C LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C
time zone: UTC
tzcode source: system (glibc)
attached base packages:
[1] tools stats graphics grDevices utils datasets methods
[8] base
loaded via a namespace (and not attached):
[1] riskreports_0.0.0.9003 compiler_4.4.2 fastmap_1.2.0
[4] cli_3.6.4 htmltools_0.5.8.1 yaml_2.3.10
[7] rmarkdown_2.29 knitr_1.49 jsonlite_1.9.0
[10] xfun_0.51 digest_0.6.37 rlang_1.1.5
[13] evaluate_1.0.3 Platform used:
OS.type file.sep dynlib.ext GUI endian pkgType path.sep
"unix" "/" ".so" "X11" "little" "source" ":"
r_arch
"" R’s capabilities:
jpeg png tiff tcltk X11 aqua
TRUE TRUE TRUE TRUE FALSE FALSE
http/ftp sockets libxml fifo cledit iconv
TRUE TRUE FALSE TRUE FALSE TRUE
NLS Rprof profmem cairo ICU long.double
TRUE TRUE TRUE TRUE TRUE TRUE
libcurl
TRUE External software:
zlib
"1.3"
bzlib
"1.0.8, 13-Jul-2019"
xz
"5.4.5"
libdeflate
"1.19"
PCRE
"10.42 2022-12-11"
ICU
"74.2"
TRE
"TRE 0.8.0 R_fixes (BSD)"
iconv
"glibc 2.39"
readline
"8.2"
BLAS
"/usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3" Graphics external software:
cairo cairoFT pango
"1.18.0" "" "1.52.1"
libpng jpeg libtiff
"1.6.43" "8.0" "LIBTIFF, Version 4.5.1" Numerical characteristics of the machine:
double.eps double.neg.eps double.xmin
2.220446e-16 1.110223e-16 2.225074e-308
double.xmax double.base double.digits
1.797693e+308 2.000000e+00 5.300000e+01
double.rounding double.guard double.ulp.digits
5.000000e+00 0.000000e+00 -5.200000e+01
double.neg.ulp.digits double.exponent double.min.exp
-5.300000e+01 1.100000e+01 -1.022000e+03
double.max.exp integer.max sizeof.long
1.024000e+03 2.147484e+09 8.000000e+00
sizeof.longlong sizeof.longdouble sizeof.pointer
8.000000e+00 1.600000e+01 8.000000e+00
sizeof.time_t longdouble.eps longdouble.neg.eps
8.000000e+00 1.084202e-19 5.421011e-20
longdouble.digits longdouble.rounding longdouble.guard
6.400000e+01 5.000000e+00 0.000000e+00
longdouble.ulp.digits longdouble.neg.ulp.digits longdouble.exponent
-6.300000e+01 -6.400000e+01 1.500000e+01
longdouble.min.exp longdouble.max.exp
-1.638200e+04 1.638400e+04 Random number generation process:
[1] "Mersenne-Twister" "Inversion" "Rejection" Information about the environment
Environmental and options variables affect how package checks and software in it might behave. Here is the environmental variables when running this report
_R_CHECK_SYSTEM_CLOCK_
FALSE
ACCEPT_EULA Y
ACTIONS_RUNNER_ACTION_ARCHIVE_CACHE
/opt/actionarchivecache
AGENT_TOOLSDIRECTORY /opt/hostedtoolcache
ANDROID_HOME /usr/local/lib/android/sdk
ANDROID_NDK /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_HOME /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_LATEST_HOME
/usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_NDK_ROOT /usr/local/lib/android/sdk/ndk/27.2.12479018
ANDROID_SDK_ROOT /usr/local/lib/android/sdk
ANT_HOME /usr/share/ant
AZURE_EXTENSION_DIR /opt/az/azcliextensions
BOOTSTRAP_HASKELL_NONINTERACTIVE
1
BUNDLE_EXT linux-amd64.deb
CHROME_BIN /usr/bin/google-chrome
CHROMEWEBDRIVER /usr/local/share/chromedriver-linux64
CI true
CONDA /usr/share/miniconda
DEBIAN_FRONTEND noninteractive
DENO_DOM_PLUGIN /opt/quarto/bin/tools/x86_64/deno_dom/libplugin.so
DENO_NO_UPDATE_CHECK 1
DENO_TLS_CA_STORE system,mozilla
DEPLOYMENT_BASEPATH /opt/runner
DOTNET_MULTILEVEL_LOOKUP
0
DOTNET_NOLOGO 1
DOTNET_SKIP_FIRST_TIME_EXPERIENCE
1
EDGEWEBDRIVER /usr/local/share/edge_driver
EDITOR vi
GECKOWEBDRIVER /usr/local/share/gecko_driver
GHCUP_INSTALL_BASE_PREFIX
/usr/local
GITHUB_ACTION __run
GITHUB_ACTION_REF
GITHUB_ACTION_REPOSITORY
GITHUB_ACTIONS true
GITHUB_ACTOR llrs-roche
GITHUB_ACTOR_ID 185338939
GITHUB_API_URL https://api.github.com
GITHUB_BASE_REF
GITHUB_ENV /home/runner/work/_temp/_runner_file_commands/set_env_f02a8e99-fd9c-4432-8e5d-56e691109e13
GITHUB_EVENT_NAME schedule
GITHUB_EVENT_PATH /home/runner/work/_temp/_github_workflow/event.json
GITHUB_GRAPHQL_URL https://api.github.com/graphql
GITHUB_HEAD_REF
GITHUB_JOB main
GITHUB_OUTPUT /home/runner/work/_temp/_runner_file_commands/set_output_f02a8e99-fd9c-4432-8e5d-56e691109e13
GITHUB_PATH /home/runner/work/_temp/_runner_file_commands/add_path_f02a8e99-fd9c-4432-8e5d-56e691109e13
GITHUB_REF refs/heads/main
GITHUB_REF_NAME main
GITHUB_REF_PROTECTED false
GITHUB_REF_TYPE branch
GITHUB_REPOSITORY pharmaR/pharmapkgs
GITHUB_REPOSITORY_ID 798326913
GITHUB_REPOSITORY_OWNER
pharmaR
GITHUB_REPOSITORY_OWNER_ID
42115094
GITHUB_RETENTION_DAYS 90
GITHUB_RUN_ATTEMPT 1
GITHUB_RUN_ID 13512867401
GITHUB_RUN_NUMBER 105
GITHUB_SERVER_URL https://github.com
GITHUB_SHA 7737be4e8b2ee227be9d7b701087f60d8b34bd7d
GITHUB_STATE /home/runner/work/_temp/_runner_file_commands/save_state_f02a8e99-fd9c-4432-8e5d-56e691109e13
GITHUB_STEP_SUMMARY /home/runner/work/_temp/_runner_file_commands/step_summary_f02a8e99-fd9c-4432-8e5d-56e691109e13
GITHUB_TRIGGERING_ACTOR
llrs-roche
GITHUB_WORKFLOW Update package repositories
GITHUB_WORKFLOW_REF pharmaR/pharmapkgs/.github/workflows/update-repos.yml@refs/heads/main
GITHUB_WORKFLOW_SHA 7737be4e8b2ee227be9d7b701087f60d8b34bd7d
GITHUB_WORKSPACE /home/runner/work/pharmapkgs/pharmapkgs
GOROOT_1_21_X64 /opt/hostedtoolcache/go/1.21.13/x64
GOROOT_1_22_X64 /opt/hostedtoolcache/go/1.22.12/x64
GOROOT_1_23_X64 /opt/hostedtoolcache/go/1.23.6/x64
GRADLE_HOME /usr/share/gradle-8.12.1
HOME /home/runner
HOMEBREW_CLEANUP_PERIODIC_FULL_DAYS
3650
HOMEBREW_NO_AUTO_UPDATE
1
ImageOS ubuntu24
ImageVersion 20250209.1.0
INVOCATION_ID 7c216e4b18b6425c9418c5461da15e18
JAVA_HOME /usr/lib/jvm/temurin-17-jdk-amd64
JAVA_HOME_11_X64 /usr/lib/jvm/temurin-11-jdk-amd64
JAVA_HOME_17_X64 /usr/lib/jvm/temurin-17-jdk-amd64
JAVA_HOME_21_X64 /usr/lib/jvm/temurin-21-jdk-amd64
JAVA_HOME_8_X64 /usr/lib/jvm/temurin-8-jdk-amd64
JOURNAL_STREAM 8:4926
LANG C.UTF-8
LD_LIBRARY_PATH /opt/R/4.4.2/lib/R/lib:/usr/local/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/temurin-17-jdk-amd64/lib/server:/opt/R/4.4.2/lib/R/lib:/usr/local/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/temurin-17-jdk-amd64/lib/server
LN_S ln -s
LOGGER_LOG_LEVEL DEBUG
MAKE make
MEMORY_PRESSURE_WATCH /sys/fs/cgroup/system.slice/runner-provisioner.service/memory.pressure
MEMORY_PRESSURE_WRITE c29tZSAyMDAwMDAgMjAwMDAwMAA=
NOT_CRAN true
NVM_DIR /home/runner/.nvm
PAGER /usr/bin/pager
PATH /snap/bin:/home/runner/.local/bin:/opt/pipx_bin:/home/runner/.cargo/bin:/home/runner/.config/composer/vendor/bin:/usr/local/.ghcup/bin:/home/runner/.dotnet/tools:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
PERFLOG_LOCATION_SETTING
RUNNER_PERFLOG
PHARMAPKGS_EXCLUDED_METRICS
assess_covr_coverage,assess_r_cmd_check
PHARMAPKGS_LIMIT 100
PHARMAPKGS_PLATFORM ubuntu-22.04
PHARMAPKGS_R_VERSION 4.4
PHARMAPKGS_REMOTE_REPO
https://cloud.r-project.org/
PIPX_BIN_DIR /opt/pipx_bin
PIPX_HOME /opt/pipx
PKGCACHE_HTTP_VERSION 2
PKGLOAD_PARENT_TEMPDIR
/tmp/RtmpCsRBSn
POWERSHELL_DISTRIBUTION_CHANNEL
GitHub-Actions-ubuntu24
PROCESSX_PS1d28589e3b0d_1740453764
YES
PWD /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_BIN_PATH /opt/quarto/bin
QUARTO_DENO /opt/quarto/bin/tools/x86_64/deno
QUARTO_DOCUMENT_PATH /home/runner/work/pharmapkgs/pharmapkgs/inst/report
QUARTO_PROFILE
QUARTO_PROJECT_DIR /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_PROJECT_ROOT /home/runner/work/pharmapkgs/pharmapkgs
QUARTO_ROOT /
QUARTO_SHARE_PATH /opt/quarto/share
R_ARCH
R_BROWSER xdg-open
R_BZIPCMD /usr/bin/bzip2
R_DOC_DIR /opt/R/4.4.2/lib/R/doc
R_GZIPCMD /usr/bin/gzip
R_HOME /opt/R/4.4.2/lib/R
R_INCLUDE_DIR /opt/R/4.4.2/lib/R/include
R_LIB_FOR_PAK /opt/R/4.4.2/lib/R/site-library
R_LIBS_SITE /opt/R/4.4.2/lib/R/site-library
R_LIBS_USER /home/runner/work/_temp/Library
R_PAPERSIZE letter
R_PAPERSIZE_USER letter
R_PDFVIEWER /usr/bin/xdg-open
R_PLATFORM x86_64-pc-linux-gnu
R_PRINTCMD /usr/bin/lpr
R_RD4PDF times,inconsolata,hyper
R_SESSION_TMPDIR /tmp/Rtmp0fYqdN
R_SHARE_DIR /opt/R/4.4.2/lib/R/share
R_STRIP_SHARED_LIB strip --strip-unneeded
R_STRIP_STATIC_LIB strip --strip-debug
R_TEXI2DVICMD /usr/bin/texi2dvi
R_UNZIPCMD /usr/bin/unzip
R_ZIPCMD /usr/bin/zip
RUNNER_ARCH X64
RUNNER_ENVIRONMENT github-hosted
RUNNER_NAME GitHub Actions 11
RUNNER_OS Linux
RUNNER_PERFLOG /home/runner/perflog
RUNNER_TEMP /home/runner/work/_temp
RUNNER_TOOL_CACHE /opt/hostedtoolcache
RUNNER_TRACKING_ID github_1fd18c0b-ba07-4a98-afbf-d6b13c78fb5e
RUNNER_USER runner
RUNNER_WORKSPACE /home/runner/work/pharmapkgs
SED /usr/bin/sed
SELENIUM_JAR_PATH /usr/share/java/selenium-server.jar
SGX_AESM_ADDR 1
SHLVL 1
STATS_D true
STATS_D_D true
STATS_D_TC true
STATS_EXT true
STATS_EXTP https://provjobdprod.z13.web.core.windows.net/settings/provjobdsettings-latest/provjobd.data
STATS_PIP false
STATS_RDCL true
STATS_TRP true
STATS_UE true
STATS_V3PS true
STATS_VMD true
STATS_VMFE true
SWIFT_PATH /usr/share/swift/usr/bin
SYSTEMD_EXEC_PID 842
TAR /usr/bin/tar
TZ UTC
USER runner
VCPKG_INSTALLATION_ROOT
/usr/local/share/vcpkg
XDG_CONFIG_HOME /home/runner/.config
XDG_RUNTIME_DIR /run/user/1001These are the options set to generate the report:
$add.smooth
[1] TRUE
$bitmapType
[1] "cairo"
$browser
[1] "xdg-open"
$browserNLdisabled
[1] FALSE
$callr.condition_handler_cli_message
function (msg)
{
custom_handler <- getOption("cli.default_handler")
if (is.function(custom_handler)) {
custom_handler(msg)
}
else {
cli_server_default(msg)
}
}
<bytecode: 0x55ca04c3b910>
<environment: namespace:cli>
$catch.script.errors
[1] FALSE
$CBoundsCheck
[1] FALSE
$check.bounds
[1] FALSE
$citation.bibtex.max
[1] 1
$continue
[1] "+ "
$contrasts
unordered ordered
"contr.treatment" "contr.poly"
$covr.record_tests
[1] TRUE
$defaultPackages
[1] "datasets" "utils" "grDevices" "graphics" "stats" "methods"
$demo.ask
[1] "default"
$deparse.cutoff
[1] 60
$device
function (width = 7, height = 7, ...)
{
grDevices::pdf(NULL, width, height, ...)
}
<bytecode: 0x55ca042f5e78>
<environment: namespace:knitr>
$device.ask.default
[1] FALSE
$digits
[1] 7
$dvipscmd
[1] "dvips"
$echo
[1] FALSE
$editor
[1] "vi"
$encoding
[1] "native.enc"
$example.ask
[1] "default"
$expressions
[1] 5000
$help.search.types
[1] "vignette" "demo" "help"
$help.try.all.packages
[1] FALSE
$htmltools.preserve.raw
[1] TRUE
$HTTPUserAgent
[1] "R/4.4.2 R (4.4.2 x86_64-pc-linux-gnu x86_64 linux-gnu) on GitHub Actions"
$internet.info
[1] 2
$keep.parse.data
[1] TRUE
$keep.parse.data.pkgs
[1] FALSE
$keep.source
[1] FALSE
$keep.source.pkgs
[1] FALSE
$knitr.in.progress
[1] TRUE
$locatorBell
[1] TRUE
$mailer
[1] "mailto"
$matprod
[1] "default"
$max.contour.segments
[1] 25000
$max.print
[1] 99999
$menu.graphics
[1] TRUE
$na.action
[1] "na.omit"
$Ncpus
[1] 1
$nwarnings
[1] 50
$OutDec
[1] "."
$pager
[1] "/opt/R/4.4.2/lib/R/bin/pager"
$papersize
[1] "letter"
$PCRE_limit_recursion
[1] NA
$PCRE_study
[1] FALSE
$PCRE_use_JIT
[1] TRUE
$pdfviewer
[1] "/usr/bin/xdg-open"
$pkgType
[1] "source"
$printcmd
[1] "/usr/bin/lpr"
$prompt
[1] "> "
$repos
CRAN
"https://cran.rstudio.com"
$rl_word_breaks
[1] " \t\n\"\\'`><=%;,|&{()}"
$rlang_trace_top_env
<environment: R_GlobalEnv>
$scipen
[1] 0
$show.coef.Pvalues
[1] TRUE
$show.error.messages
[1] TRUE
$show.signif.stars
[1] TRUE
$showErrorCalls
[1] TRUE
$showNCalls
[1] 50
$showWarnCalls
[1] FALSE
$str
$str$strict.width
[1] "no"
$str$digits.d
[1] 3
$str$vec.len
[1] 4
$str$list.len
[1] 99
$str$deparse.lines
NULL
$str$drop.deparse.attr
[1] TRUE
$str$formatNum
function (x, ...)
format(x, trim = TRUE, drop0trailing = TRUE, ...)
<environment: 0x55ca04113520>
$str.dendrogram.last
[1] "`"
$texi2dvi
[1] "/usr/bin/texi2dvi"
$tikzMetricsDictionary
[1] "validation_report_DoE.base_v1.2.4-tikzDictionary"
$timeout
[1] 60
$try.outFile
A connection with
description ""
class "file"
mode "w+b"
text "binary"
opened "opened"
can read "yes"
can write "yes"
$ts.eps
[1] 1e-05
$ts.S.compat
[1] FALSE
$unzip
[1] "/usr/bin/unzip"
$useFancyQuotes
[1] FALSE
$verbose
[1] FALSE
$warn
[1] 0
$warning.length
[1] 1000
$warnPartialMatchArgs
[1] FALSE
$warnPartialMatchAttr
[1] FALSE
$warnPartialMatchDollar
[1] FALSE
$width
[1] 80